RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 KATNAL1Q9BW62 490 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 PARP2Q9UGN5 583 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 LCMT1Q9UIC8 334 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 NEU2Q9Y3R4 380 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 TULP2O00295 520 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 AXLP30530 894 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 GBP1P32455 592 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 INHBEP58166 350 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 PPP1R26Q5T8A7 1209 aaPredicted RBP20.15■□□□□ 0.82
SMPD3-203ENST00000563226 ATL2Q8NHH9 583 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 CENPHQ9H3R5 247 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 ZWILCHQ9H900 591 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 FAM49BQ9NUQ9 324 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 WDR35Q9P2L0 1181 aa20.15■□□□□ 0.82
SMPD3-203ENST00000563226 SMIM28A0A1B0GU29 152 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 LRRD1A4D1F6 860 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 SHBGP04278 402 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 VPS41P49754 854 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 CRYBB1P53674 252 aaPredicted RBP20.14■□□□□ 0.81
SMPD3-203ENST00000563226 KCNT1Q5JUK3 1230 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 LRRC52Q8N7C0 313 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 ARRDC4Q8NCT1 418 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 FNIP1Q8TF40 1166 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 SEMA4AQ9H3S1 761 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 GOLGA2P5Q9HBQ8 144 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 MTRF1LQ9UGC7 380 aaKnown RBP20.14■□□□□ 0.81
SMPD3-203ENST00000563226 GABRQQ9UN88 632 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 hCG_1818297A0A087WSY0 165 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 C3orf70A6NLC5 250 aaPredicted RBP20.14■□□□□ 0.81
SMPD3-203ENST00000563226 E5RJQ4 531 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 MYZAPP0CAP1 466 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 CDKN2BP42772 138 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 RGS7P49802 495 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 SOX4Q06945 474 aaPredicted RBP20.14■□□□□ 0.81
SMPD3-203ENST00000563226 SOWAHAQ2M3V2 549 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 SPDYCQ5MJ68 293 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 FAM102AQ5T9C2 384 aaPredicted RBP20.14■□□□□ 0.81
SMPD3-203ENST00000563226 TRNP1Q6NT89 227 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 GRK7Q8WTQ7 553 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 DPEP3Q9H4B8 488 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 WHRNQ9P202 907 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 UBQLN1Q9UMX0 589 aaKnown RBP20.14■□□□□ 0.81
SMPD3-203ENST00000563226 SCN10AQ9Y5Y9 1956 aa20.14■□□□□ 0.81
SMPD3-203ENST00000563226 SPTLC1O15269 473 aa20.13■□□□□ 0.81
SMPD3-203ENST00000563226 GAS8O95995 478 aa20.13■□□□□ 0.81
SMPD3-203ENST00000563226 PSMC4P43686 418 aa20.13■□□□□ 0.81
SMPD3-203ENST00000563226 ATP1A2P50993 1020 aa20.13■□□□□ 0.81
SMPD3-203ENST00000563226 CALCOCO2Q13137 446 aa20.13■□□□□ 0.81
SMPD3-203ENST00000563226 TTC19Q6DKK2 380 aaPredicted RBP20.13■□□□□ 0.81
SMPD3-203ENST00000563226 RHBDF2Q6PJF5 856 aa20.13■□□□□ 0.81
SMPD3-203ENST00000563226 FAM183BPQ6ZVS7 135 aa20.13■□□□□ 0.81
SMPD3-203ENST00000563226 SESTD1Q86VW0 696 aa20.13■□□□□ 0.81
SMPD3-203ENST00000563226 FAM228AQ86W67 206 aa20.13■□□□□ 0.81
SMPD3-203ENST00000563226 TTC30AQ86WT1 665 aa20.13■□□□□ 0.81
SMPD3-203ENST00000563226 TTC39CQ8N584 583 aa20.13■□□□□ 0.81
SMPD3-203ENST00000563226 SMG8Q8ND04 991 aaKnown RBP20.13■□□□□ 0.81
SMPD3-203ENST00000563226 TRIB2Q92519 343 aa20.13■□□□□ 0.81
SMPD3-203ENST00000563226 HAUS1Q96CS2 278 aa20.13■□□□□ 0.81
SMPD3-203ENST00000563226 PABPC3Q9H361 631 aaKnown RBP20.13■□□□□ 0.81
SMPD3-203ENST00000563226 FAM124BQ9H5Z6 455 aaPredicted RBP20.13■□□□□ 0.81
SMPD3-203ENST00000563226 AAASQ9NRG9 546 aa20.13■□□□□ 0.81
SMPD3-203ENST00000563226 HOMER3Q9NSC5 361 aa20.13■□□□□ 0.81
SMPD3-203ENST00000563226 DDX56Q9NY93 547 aaKnown RBP20.13■□□□□ 0.81
SMPD3-203ENST00000563226 DNPEPQ9ULA0 475 aa20.13■□□□□ 0.81
SMPD3-203ENST00000563226 IPPQ9Y573 584 aa20.13■□□□□ 0.81
SMPD3-203ENST00000563226 LIASO43766 372 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 SHOX2O60902 331 aaPredicted RBP20.12■□□□□ 0.81
SMPD3-203ENST00000563226 DUSP11O75319 330 aaKnown RBP20.12■□□□□ 0.81
SMPD3-203ENST00000563226 CHKAP35790 457 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 CETN2P41208 172 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 RAB6CQ53S08 254 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 SYDE1Q6ZW31 735 aaPredicted RBP20.12■□□□□ 0.81
SMPD3-203ENST00000563226 POLNQ7Z5Q5 900 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 SNF8Q96H20 258 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 RAB6CQ9H0N0 254 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 KIAA1257Q9ULG3 409 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 TLL2Q9Y6L7 1015 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 GOLGA6L10A6NI86 522 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 HMGB1P1B2RPK0 211 aaPredicted RBP20.12■□□□□ 0.81
SMPD3-203ENST00000563226 PIRO00625 290 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 PGK1P00558 417 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 FGFR1P11362 822 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 CYBAP13498 195 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 PTPN7P35236 360 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 TRIM32Q13049 653 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 TAF5Q15542 800 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 PKDCCQ504Y2 493 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 TFDP3Q5H9I0 405 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 GNASQ5JWF2 1037 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 SH3PXD2AQ5TCZ1 1133 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 CXCL17Q6UXB2 119 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 CCDC25Q86WR0 208 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 GLIS1Q8NBF1 620 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 IPO4Q8TEX9 1081 aaKnown RBP20.12■□□□□ 0.81
SMPD3-203ENST00000563226 WNT8BQ93098 351 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 PCSK1NQ9UHG2 260 aa20.12■□□□□ 0.81
SMPD3-203ENST00000563226 TJP3O95049 919 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 CD48P09326 243 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 ACTN2P35609 894 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 ITGA8P53708 1063 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms