RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 CFAP221Q4G0U5 840 aa19.99■□□□□ 0.79
RAB40C-207ENST00000563109 PPM1LQ5SGD2 360 aa19.99■□□□□ 0.79
RAB40C-207ENST00000563109 SPECC1LQ69YQ0 1117 aa19.99■□□□□ 0.79
RAB40C-207ENST00000563109 RTL10Q7L3V2 364 aa19.99■□□□□ 0.79
RAB40C-207ENST00000563109 TCEAL8Q8IYN2 117 aa19.99■□□□□ 0.79
RAB40C-207ENST00000563109 SLC7A14Q8TBB6 771 aa19.99■□□□□ 0.79
RAB40C-207ENST00000563109 PPM1EQ8WY54 764 aa19.99■□□□□ 0.79
RAB40C-207ENST00000563109 LPIN3Q9BQK8 851 aa19.99■□□□□ 0.79
RAB40C-207ENST00000563109 EDEM3Q9BZQ6 932 aa19.99■□□□□ 0.79
RAB40C-207ENST00000563109 FOXN3O00409 490 aaPredicted RBP19.98■□□□□ 0.79
RAB40C-207ENST00000563109 LINC01565O15544 149 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 AP5Z1O43299 807 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 PNMA6AP0CW24 399 aaPredicted RBP19.98■□□□□ 0.79
RAB40C-207ENST00000563109 GNA15P30679 374 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 SOX5P35711 763 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 ZNF75DP51815 510 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 CDR1P51861 262 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 JAM2P57087 298 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 BPIFB4P59827 614 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 PTK2Q05397 1052 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 ADAM15Q13444 863 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 STILQ15468 1287 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 ARHGAP17Q68EM7 881 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 TMEM184AQ6ZMB5 413 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 FAM35AQ86V20 835 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 VSTM4Q8IW00 320 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 FAM71AQ8IYT1 594 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 C12orf29Q8N999 325 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 ZNF397Q8NF99 534 aaPredicted RBP19.98■□□□□ 0.79
RAB40C-207ENST00000563109 VN1R2Q8NFZ6 395 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 SLC2A14Q8TDB8 520 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 PABPC5Q96DU9 382 aaKnown RBP19.98■□□□□ 0.79
RAB40C-207ENST00000563109 CYFIP2Q96F07 1278 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 SMARCD1Q96GM5 515 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 B3GNT5Q9BYG0 378 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 GPR88Q9GZN0 384 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 SFXN1Q9H9B4 322 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 MYO6Q9UM54 1294 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 YIPF1Q9Y548 306 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 INSL5Q9Y5Q6 135 aa19.98■□□□□ 0.79
RAB40C-207ENST00000563109 RNF225M0QZC1 329 aaPredicted RBP19.97■□□□□ 0.79
RAB40C-207ENST00000563109 CYP26A1O43174 497 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 MED7O43513 233 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 SEC24AO95486 1093 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 VNN2O95498 520 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 GLP2RO95838 553 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 LRG1P02750 347 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 BDNFP23560 247 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 ADORA2BP29275 332 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 MAGEA11P43364 429 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 ALDH1A3P47895 512 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 RPL10AP62906 217 aaKnown RBP19.97■□□□□ 0.79
RAB40C-207ENST00000563109 RBM10P98175 930 aaKnown RBP19.97■□□□□ 0.79
RAB40C-207ENST00000563109 KCNC3Q14003 757 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 VSTM1Q6UX27 236 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 FUKQ8N0W3 1084 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 MRFAP1L1Q96HT8 127 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 HNRNPABQ99729 332 aaKnown RBP19.97■□□□□ 0.79
RAB40C-207ENST00000563109 ZNF518BQ9C0D4 1074 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 KRT82Q9NSB4 513 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 ZDHHC7Q9NXF8 308 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 HESX1Q9UBX0 185 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 SLC27A5Q9Y2P5 690 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 MYH10P35580 1976 aa19.97■□□□□ 0.79
RAB40C-207ENST00000563109 A0A1W2PQJ5 194 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 CLDN5O00501 218 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 TRIM66O15016 1216 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 THAP12O43422 761 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 ZMYND10O75800 440 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 GFPT2O94808 682 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 HNRNPA1P09651 372 aaKnown RBP eCLIP19.96■□□□□ 0.79
RAB40C-207ENST00000563109 CCDC172P0C7W6 258 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 FAM200BP0CF97 657 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 HAPLN1P10915 354 aaPredicted RBP19.96■□□□□ 0.79
RAB40C-207ENST00000563109 CYP2F1P24903 491 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 BRD2P25440 801 aaKnown RBP19.96■□□□□ 0.79
RAB40C-207ENST00000563109 ANXA13P27216 316 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 HOXA9P31269 272 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 PDE6CP51160 858 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 SLC8A3P57103 927 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 COL19A1Q14993 1142 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 CTC1Q2NKJ3 1217 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 GOLGA7BQ2TAP0 167 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 PPP1R26Q5T8A7 1209 aaPredicted RBP19.96■□□□□ 0.79
RAB40C-207ENST00000563109 ANKRD54Q6NXT1 300 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 SCN4BQ8IWT1 228 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 ELMOD1Q8N336 334 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 TTC9BQ8N6N2 239 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 MAFAQ8NHW3 353 aaPredicted RBP19.96■□□□□ 0.79
RAB40C-207ENST00000563109 TTYH3Q9C0H2 523 aa19.96■□□□□ 0.79
RAB40C-207ENST00000563109 CDH23Q9H251 3354 aa19.95■□□□□ 0.78
RAB40C-207ENST00000563109 XYLBO75191 536 aa19.95■□□□□ 0.78
RAB40C-207ENST00000563109 AP1G2O75843 785 aa19.95■□□□□ 0.78
RAB40C-207ENST00000563109 HOXB8P17481 243 aaPredicted RBP19.95■□□□□ 0.78
RAB40C-207ENST00000563109 GRIK1P39086 918 aa19.95■□□□□ 0.78
RAB40C-207ENST00000563109 EPHB3P54753 998 aa19.95■□□□□ 0.78
RAB40C-207ENST00000563109 TWF1Q12792 350 aa19.95■□□□□ 0.78
RAB40C-207ENST00000563109 VEPH1Q14D04 833 aa19.95■□□□□ 0.78
RAB40C-207ENST00000563109 TMC6Q7Z403 805 aa19.95■□□□□ 0.78
RAB40C-207ENST00000563109 BAP1Q92560 729 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms