RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 MCCP23508 829 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 AFF3P51826 1226 aaKnown RBP6.87□□□□□ -1.31
LRRC28-220ENST00000561253 RCAN1P53805 252 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 LGALS4P56470 323 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 MRPS9P82933 396 aaKnown RBP6.87□□□□□ -1.31
LRRC28-220ENST00000561253 SRSF2Q01130 221 aaKnown RBP6.87□□□□□ -1.31
LRRC28-220ENST00000561253 GRM4Q14833 912 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 ACAP2Q15057 778 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 PCBP2Q15366 365 aaKnown RBP eCLIP6.87□□□□□ -1.31
LRRC28-220ENST00000561253 VWA3BQ502W6 1294 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 TOR2AQ5JU69 321 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 IFIT1BQ5T764 474 aaKnown RBP6.87□□□□□ -1.31
LRRC28-220ENST00000561253 APOA5Q6Q788 366 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 BLOC1S2Q6QNY1 142 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 RUFY3Q7L099 469 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 BMP8AQ7Z5Y6 402 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 OR5AN1Q8NGI8 311 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 RSAD2Q8WXG1 361 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 PARK7Q99497 189 aaKnown RBP6.87□□□□□ -1.31
LRRC28-220ENST00000561253 MAP3K14Q99558 947 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 UBAC1Q9BSL1 405 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 C22orf23Q9BZE7 217 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 KCTD10Q9H3F6 313 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 TMOD4Q9NZQ9 345 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 Q9UFV3 132 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 PCDHB6Q9Y5E3 794 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 MYH4Q9Y623 1939 aa6.87□□□□□ -1.31
LRRC28-220ENST00000561253 BAZ2BQ9UIF8 2168 aaKnown RBP6.86□□□□□ -1.31
LRRC28-220ENST00000561253 A0A0A6YYJ9 748 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 KLHL33A6NCF5 533 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 VWA5AO00534 786 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 ATP2A1O14983 1001 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 EIF5BO60841 1220 aaKnown RBP6.86□□□□□ -1.31
LRRC28-220ENST00000561253 CUTAO60888 179 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 PSMA5P28066 241 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 SLC1A4P43007 532 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 SARSP49591 514 aaKnown RBP6.86□□□□□ -1.31
LRRC28-220ENST00000561253 DLX2Q07687 328 aaPredicted RBP6.86□□□□□ -1.31
LRRC28-220ENST00000561253 ST3GAL1Q11201 340 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 SPIDRQ14159 915 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 COG2Q14746 738 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 WTAPQ15007 396 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 FAM110CQ1W6H9 321 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 GPATCH4Q5T3I0 446 aaKnown RBP6.86□□□□□ -1.31
LRRC28-220ENST00000561253 Q6ZUG5 572 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 TMEM151BQ8IW70 566 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 CDYL2Q8N8U2 506 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 OR14C36Q8NHC7 312 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 GAB3Q8WWW8 586 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 AUTS2Q8WXX7 1259 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 DACT3Q96B18 629 aaPredicted RBP6.86□□□□□ -1.31
LRRC28-220ENST00000561253 CPVLQ9H3G5 476 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 KAT14Q9H8E8 782 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 SLC38A10Q9HBR0 1119 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 SAE1Q9UBE0 346 aaPredicted RBP6.86□□□□□ -1.31
LRRC28-220ENST00000561253 PRSS50Q9UI38 385 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 MAGEL2Q9UJ55 1249 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 CDC42EP3Q9UKI2 254 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 TMPRSS11EQ9UL52 423 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 LUC7L2Q9Y383 392 aaKnown RBP6.86□□□□□ -1.31
LRRC28-220ENST00000561253 RABGAP1Q9Y3P9 1069 aa6.86□□□□□ -1.31
LRRC28-220ENST00000561253 FRMPD2Q68DX3 1309 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-220ENST00000561253 E2F8A0AVK6 867 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 SH3D21A4FU49 640 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 TMEM232C9JQI7 657 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 NUAK1O60285 661 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 FLOT1O75955 427 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 PLEKHA8P1O95397 391 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 CYP1A1P04798 512 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-220ENST00000561253 GOLGA8HP0CJ92 632 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 RXRAP19793 462 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 XPAP23025 273 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-220ENST00000561253 PDIA3P30101 505 aaKnown RBP6.85□□□□□ -1.31
LRRC28-220ENST00000561253 SLC16A2P36021 539 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 GCLCP48506 637 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-220ENST00000561253 KCNQ1P51787 676 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 STAT2P52630 851 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 AK2P54819 239 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 KRT85P78386 507 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 IRX3P78415 501 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-220ENST00000561253 PIN1Q13526 163 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-220ENST00000561253 TRIM25Q14258 630 aaKnown RBP6.85□□□□□ -1.31
LRRC28-220ENST00000561253 ASPRV1Q53RT3 343 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 TMEM200BQ69YZ2 307 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 OTUD7BQ6GQQ9 843 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 RAVER1Q8IY67 606 aaKnown RBP6.85□□□□□ -1.31
LRRC28-220ENST00000561253 CARFQ8N187 725 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 TMTC2Q8N394 836 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 MB21D1Q8N884 522 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 DYDC2Q96IM9 177 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 SLF1Q9BQI6 1058 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 ARHGAP39Q9C0H5 1083 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 UBA5Q9GZZ9 404 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 TMEM168Q9H0V1 697 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 PORCNQ9H237 461 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 RANBP17Q9H2T7 1088 aaKnown RBP6.85□□□□□ -1.31
LRRC28-220ENST00000561253 RIOX1Q9H6W3 641 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 JMJD4Q9H9V9 463 aa6.85□□□□□ -1.31
LRRC28-220ENST00000561253 POLR3BQ9NW08 1133 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-220ENST00000561253 HOXC10Q9NYD6 342 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms