RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 M0QZQ0 153 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 SGK1O00141 431 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 PLK4O00444 970 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 FLRT2O43155 660 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 ZNF217O75362 1048 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 LARGE1O95461 756 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 APODP05090 189 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 CKMP06732 381 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 ATXN1LP0C7T5 689 aaKnown RBP10.36□□□□□ -0.75
HERC1-210ENST00000560897 HNRNPLP14866 589 aaKnown RBP eCLIP10.36□□□□□ -0.75
HERC1-210ENST00000560897 NMT1P30419 496 aaKnown RBP10.36□□□□□ -0.75
HERC1-210ENST00000560897 HNF1BP35680 557 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 NLRP12P59046 1061 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 EXOSC10Q01780 885 aaKnown RBP10.36□□□□□ -0.75
HERC1-210ENST00000560897 SEMG2Q02383 582 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 CAMK2BQ13554 666 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 SUZ12Q15022 739 aaKnown RBP10.36□□□□□ -0.75
HERC1-210ENST00000560897 EML3Q32P44 896 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 TXNDC8Q6A555 127 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 GALNT17Q6IS24 598 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 IL27RAQ6UWB1 636 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 ALKAL1Q6UXT8 129 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 MON1AQ86VX9 555 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 EFCAB13Q8IY85 973 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 CEP120Q8N960 986 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 IL17RCQ8NAC3 791 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 TCHPQ9BT92 498 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 TTC12Q9H892 705 aaPredicted RBP10.36□□□□□ -0.75
HERC1-210ENST00000560897 TRPC7Q9HCX4 862 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 ANO2Q9NQ90 1003 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 CNTN3Q9P232 1028 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 DNMT3LQ9UJW3 386 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 TNFSF13BQ9Y275 285 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.36□□□□□ -0.75
HERC1-210ENST00000560897 PIEZO2Q9H5I5 2752 aa10.36□□□□□ -0.75
HERC1-210ENST00000560897 HELZP42694 1942 aaKnown RBP10.35□□□□□ -0.75
HERC1-210ENST00000560897 TRAV19A0A0A6YYK7 116 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 EDN1P05305 212 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 USP17L7P0C7H9 530 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 PRR29P0C7W0 189 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 HARSP12081 509 aaKnown RBP10.35□□□□□ -0.75
HERC1-210ENST00000560897 ATF6P18850 670 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 IL12RB1P42701 662 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 RHDQ02161 417 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 DMP1Q13316 513 aaPredicted RBP10.35□□□□□ -0.75
HERC1-210ENST00000560897 AAMPQ13685 434 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 NECTIN1Q15223 517 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 ZNF77Q15935 545 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 SLC39A12Q504Y0 691 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 NT5DC1Q5TFE4 455 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 TRMT11Q7Z4G4 463 aaKnown RBP10.35□□□□□ -0.75
HERC1-210ENST00000560897 RIN3Q8TB24 985 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 SPATA18Q8TC71 538 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 HAS1Q92839 578 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 FOXJ1Q92949 421 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 KIFC3Q9BVG8 833 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 CDT1Q9H211 546 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 TM7SF3Q9NS93 570 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 TOR4AQ9NXH8 423 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 CALCOCO1Q9P1Z2 691 aa10.35□□□□□ -0.75
HERC1-210ENST00000560897 UXTQ9UBK9 157 aaPredicted RBP10.35□□□□□ -0.75
HERC1-210ENST00000560897 MAGED2Q9UNF1 606 aaPredicted RBP10.35□□□□□ -0.75
HERC1-210ENST00000560897 OBSL1O75147 1896 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 MYO18AQ92614 2054 aaKnown RBP10.34□□□□□ -0.75
HERC1-210ENST00000560897 MEI4A8MW99 385 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 K7ERI5 159 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 HMGB1P09429 215 aaKnown RBP10.34□□□□□ -0.75
HERC1-210ENST00000560897 ZNF883P0CG24 379 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 ODC1P11926 461 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 XRCC6P12956 609 aaKnown RBP eCLIP10.34□□□□□ -0.75
HERC1-210ENST00000560897 TYMPP19971 482 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 OPRD1P41143 372 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 MATKP42679 507 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 CSRP3P50461 194 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 USP4Q13107 963 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 KRT32Q14532 448 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 SMAD1Q15797 465 aaKnown RBP10.34□□□□□ -0.75
HERC1-210ENST00000560897 TMPRSS12Q86WS5 348 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 SLC41A1Q8IVJ1 513 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 C2orf15Q8WU43 125 aaKnown RBP10.34□□□□□ -0.75
HERC1-210ENST00000560897 BSNDQ8WZ55 320 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 WBP1Q96G27 269 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 PNKPQ96T60 521 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 HSD17B14Q9BPX1 270 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 MRPL4Q9BYD3 311 aaKnown RBP10.34□□□□□ -0.75
HERC1-210ENST00000560897 GAREM1Q9H706 876 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 TMEM206Q9H813 350 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 TUBGCP4Q9UGJ1 667 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 CYP8B1Q9UNU6 501 aa10.34□□□□□ -0.75
HERC1-210ENST00000560897 A0A087WWV3 80 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 IGHV1OR15-9A0A0B4J2B8 117 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 A0A1B0GTW7 788 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 ARHGEF35A5YM69 484 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 FAM205CA6NFA0 338 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 TNFSF14O43557 240 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 XPOTO43592 962 aaKnown RBP10.33□□□□□ -0.76
HERC1-210ENST00000560897 TLX3O43711 291 aaPredicted RBP10.33□□□□□ -0.76
HERC1-210ENST00000560897 CILPO75339 1184 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 DKK1O94907 266 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 KAT7O95251 611 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms