RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 CCDC127Q96BQ5 260 aa15.07■□□□□ 0
TPM1-223ENST00000560445 MYRFLQ96LU7 910 aa15.07■□□□□ 0
TPM1-223ENST00000560445 HINFPQ9BQA5 517 aa15.07■□□□□ 0
TPM1-223ENST00000560445 BLZF1Q9H2G9 400 aa15.07■□□□□ 0
TPM1-223ENST00000560445 FANCMQ8IYD8 2048 aa15.06■□□□□ 0
TPM1-223ENST00000560445 TRAV19A0A0A6YYK7 116 aa15.06■□□□□ 0
TPM1-223ENST00000560445 ARNTLO00327 626 aa15.06■□□□□ 0
TPM1-223ENST00000560445 TGFB1I1O43294 461 aa15.06■□□□□ 0
TPM1-223ENST00000560445 USP17L7P0C7H9 530 aa15.06■□□□□ 0
TPM1-223ENST00000560445 CD72P21854 359 aa15.06■□□□□ 0
TPM1-223ENST00000560445 WNT7BP56706 349 aa15.06■□□□□ 0
TPM1-223ENST00000560445 CYP4F8P98187 520 aa15.06■□□□□ 0
TPM1-223ENST00000560445 BECN1Q14457 450 aa15.06■□□□□ 0
TPM1-223ENST00000560445 PDGFRLQ15198 375 aa15.06■□□□□ 0
TPM1-223ENST00000560445 ITPRIPL2Q3MIP1 535 aa15.06■□□□□ 0
TPM1-223ENST00000560445 MON1AQ86VX9 555 aa15.06■□□□□ 0
TPM1-223ENST00000560445 SLC9A9Q8IVB4 645 aa15.06■□□□□ 0
TPM1-223ENST00000560445 GPR161Q8N6U8 529 aaKnown RBP15.06■□□□□ 0
TPM1-223ENST00000560445 RDH13Q8NBN7 331 aa15.06■□□□□ 0
TPM1-223ENST00000560445 GLIS3Q8NEA6 775 aa15.06■□□□□ 0
TPM1-223ENST00000560445 ZSWIM2Q8NEG5 633 aa15.06■□□□□ 0
TPM1-223ENST00000560445 OR5B17Q8NGF7 314 aa15.06■□□□□ 0
TPM1-223ENST00000560445 CCDC26Q8TAB7 109 aa15.06■□□□□ 0
TPM1-223ENST00000560445 RUBCNQ92622 972 aa15.06■□□□□ 0
TPM1-223ENST00000560445 SPATA17Q96L03 361 aa15.06■□□□□ 0
TPM1-223ENST00000560445 IL21Q9HBE4 155 aa15.06■□□□□ 0
TPM1-223ENST00000560445 SLC39A2Q9NP94 309 aa15.06■□□□□ 0
TPM1-223ENST00000560445 PRMT8Q9NR22 394 aaPredicted RBP15.06■□□□□ 0
TPM1-223ENST00000560445 TDP1Q9NUW8 608 aa15.06■□□□□ 0
TPM1-223ENST00000560445 GTF3C4Q9UKN8 822 aa15.06■□□□□ 0
TPM1-223ENST00000560445 RAB23Q9ULC3 237 aa15.06■□□□□ 0
TPM1-223ENST00000560445 MAGED2Q9UNF1 606 aaPredicted RBP15.06■□□□□ 0
TPM1-223ENST00000560445 FRMD4BQ9Y2L6 1034 aa15.06■□□□□ 0
TPM1-223ENST00000560445 CACNA1IQ9P0X4 2223 aa15.06■□□□□ 0
TPM1-223ENST00000560445 MYBPHLA2RUH7 354 aa15.05■□□□□ -0
TPM1-223ENST00000560445 SPECC1L-ADORA2AF8WAN1 911 aa15.05■□□□□ -0
TPM1-223ENST00000560445 CALUO43852 315 aaPredicted RBP15.05■□□□□ -0
TPM1-223ENST00000560445 LRRN2O75325 713 aa15.05■□□□□ -0
TPM1-223ENST00000560445 PFKFB1P16118 471 aa15.05■□□□□ -0
TPM1-223ENST00000560445 ACAT1P24752 427 aaKnown RBP15.05■□□□□ -0
TPM1-223ENST00000560445 CTHP32929 405 aa15.05■□□□□ -0
TPM1-223ENST00000560445 HOXD13P35453 343 aa15.05■□□□□ -0
TPM1-223ENST00000560445 SYKP43405 635 aa15.05■□□□□ -0
TPM1-223ENST00000560445 BIRC3Q13489 604 aa15.05■□□□□ -0
TPM1-223ENST00000560445 CUL4BQ13620 913 aa15.05■□□□□ -0
TPM1-223ENST00000560445 STXBP5Q5T5C0 1151 aa15.05■□□□□ -0
TPM1-223ENST00000560445 LMBRD2Q68DH5 695 aaPredicted RBP15.05■□□□□ -0
TPM1-223ENST00000560445 FAM171BQ6P995 826 aa15.05■□□□□ -0
TPM1-223ENST00000560445 LIMS2Q7Z4I7 341 aa15.05■□□□□ -0
TPM1-223ENST00000560445 SCN4BQ8IWT1 228 aa15.05■□□□□ -0
TPM1-223ENST00000560445 SPEM1Q8N4L4 309 aa15.05■□□□□ -0
TPM1-223ENST00000560445 MYCBPAPQ8TBZ2 947 aa15.05■□□□□ -0
TPM1-223ENST00000560445 PKMYT1Q99640 499 aa15.05■□□□□ -0
TPM1-223ENST00000560445 MKNK1Q9BUB5 465 aa15.05■□□□□ -0
TPM1-223ENST00000560445 ELOVL4Q9GZR5 314 aa15.05■□□□□ -0
TPM1-223ENST00000560445 LMAN1LQ9HAT1 526 aa15.05■□□□□ -0
TPM1-223ENST00000560445 SERTAD1Q9UHV2 236 aa15.05■□□□□ -0
TPM1-223ENST00000560445 MTF2Q9Y483 593 aaPredicted RBP15.05■□□□□ -0
TPM1-223ENST00000560445 R4GN57 208 aa15.05■□□□□ -0
TPM1-223ENST00000560445 COL4A2P08572 1712 aa15.05■□□□□ -0
TPM1-223ENST00000560445 GVINP1Q7Z2Y8 2422 aa15.05■□□□□ -0
TPM1-223ENST00000560445 ZNF638Q14966 1978 aaKnown RBP15.04■□□□□ -0
TPM1-223ENST00000560445 SLC38A8A6NNN8 435 aa15.04■□□□□ -0
TPM1-223ENST00000560445 PDXKO00764 312 aa15.04■□□□□ -0
TPM1-223ENST00000560445 CLIC2O15247 247 aa15.04■□□□□ -0
TPM1-223ENST00000560445 ACTN4O43707 911 aaKnown RBP15.04■□□□□ -0
TPM1-223ENST00000560445 F11P03951 625 aa15.04■□□□□ -0
TPM1-223ENST00000560445 CKMP06732 381 aa15.04■□□□□ -0
TPM1-223ENST00000560445 HMGA1P17096 107 aaKnown RBP15.04■□□□□ -0
TPM1-223ENST00000560445 CCNE1P24864 410 aa15.04■□□□□ -0
TPM1-223ENST00000560445 CYP2F1P24903 491 aa15.04■□□□□ -0
TPM1-223ENST00000560445 RPL13P26373 211 aaKnown RBP15.04■□□□□ -0
TPM1-223ENST00000560445 GNL1P36915 607 aaPredicted RBP15.04■□□□□ -0
TPM1-223ENST00000560445 GRIK1P39086 918 aa15.04■□□□□ -0
TPM1-223ENST00000560445 CXCL12P48061 93 aa15.04■□□□□ -0
TPM1-223ENST00000560445 FOXK2Q01167 660 aa15.04■□□□□ -0
TPM1-223ENST00000560445 CYP27A1Q02318 531 aa15.04■□□□□ -0
TPM1-223ENST00000560445 FAM160A1Q05DH4 1040 aa15.04■□□□□ -0
TPM1-223ENST00000560445 MTAPQ13126 283 aa15.04■□□□□ -0
TPM1-223ENST00000560445 KCNB1Q14721 858 aa15.04■□□□□ -0
TPM1-223ENST00000560445 DDR2Q16832 855 aa15.04■□□□□ -0
TPM1-223ENST00000560445 WDR72Q3MJ13 1102 aa15.04■□□□□ -0
TPM1-223ENST00000560445 CPA6Q8N4T0 437 aa15.04■□□□□ -0
TPM1-223ENST00000560445 KIAA1958Q8N8K9 716 aa15.04■□□□□ -0
TPM1-223ENST00000560445 MAB21L3Q8N8X9 362 aa15.04■□□□□ -0
TPM1-223ENST00000560445 OR6B3Q8NGW1 331 aa15.04■□□□□ -0
TPM1-223ENST00000560445 TAF4BQ92750 862 aa15.04■□□□□ -0
TPM1-223ENST00000560445 PAGE5Q96GU1 130 aa15.04■□□□□ -0
TPM1-223ENST00000560445 TNIP3Q96KP6 325 aa15.04■□□□□ -0
TPM1-223ENST00000560445 SLC46A2Q9BY10 475 aa15.04■□□□□ -0
TPM1-223ENST00000560445 IMPG2Q9BZV3 1241 aa15.04■□□□□ -0
TPM1-223ENST00000560445 TMLHEQ9NVH6 421 aa15.04■□□□□ -0
TPM1-223ENST00000560445 DENND4CQ5VZ89 1909 aa15.04■□□□□ -0
TPM1-223ENST00000560445 PTPRJQ12913 1337 aa15.03■□□□□ -0
TPM1-223ENST00000560445 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.03■□□□□ -0
TPM1-223ENST00000560445 A0A1W2PQ27 194 aa15.03■□□□□ -0
TPM1-223ENST00000560445 A0A1W2PQ64 194 aa15.03■□□□□ -0
TPM1-223ENST00000560445 A0A1W2PQD8 194 aa15.03■□□□□ -0
TPM1-223ENST00000560445 ATG13O75143 517 aa15.03■□□□□ -0
TPM1-223ENST00000560445 PRAMEF12O95522 483 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms