RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 KIAA0319Q5VV43 1072 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 OR6B2Q6IFH4 312 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 SLC2A14Q8TDB8 520 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 CLEC4CQ8WTT0 213 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 ZNF560Q96MR9 790 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 TRIM31Q9BZY9 425 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 STIM2Q9P246 746 aa11.49□□□□□ -0.57
SNRPA1-211ENST00000560433 A0A0U1RQG5 324 aaPredicted RBP11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 CCDC66A2RUB6 948 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 CES2O00748 559 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 TTI1O43156 1089 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 GABBR2O75899 941 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 ZRANB2O95218 330 aaKnown RBP eCLIP11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 TKTP29401 623 aaKnown RBP11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 KCNJ1P48048 391 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 CARSP49589 748 aaKnown RBP11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 ITIH3Q06033 890 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 DSC3Q14574 896 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 CDO1Q16878 200 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 SV2CQ496J9 727 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 PPP1R15BQ5SWA1 713 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 SEL1L2Q5TEA6 688 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 LCLAT1Q6UWP7 414 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 FAM183BPQ6ZVS7 135 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 C3orf20Q8ND61 904 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 NDRG1Q92597 394 aaKnown RBP11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 SENP8Q96LD8 212 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 B4GALT3O60512 393 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 BEST1O76090 585 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 B3GAT3O94766 335 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 PSMA2P25787 234 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 SNX1Q13596 522 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 KAZNQ674X7 775 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 WDR93Q6P2C0 686 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 ARFGAP1Q8N6T3 406 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 LINC01599Q8WXQ3 324 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 DDX27Q96GQ7 796 aaKnown RBP11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 SCLYQ96I15 445 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 TRIM51Q9BSJ1 452 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 ZWILCHQ9H900 591 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 GDAP2Q9NXN4 497 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 PCSK1NQ9UHG2 260 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 PTPN22Q9Y2R2 807 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 FRMPD3Q5JV73 1810 aa11.48□□□□□ -0.57
SNRPA1-211ENST00000560433 CDH23Q9H251 3354 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 KRT10P13645 584 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 LCP1P13796 627 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 LRPAP1P30533 357 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 ADCY2Q08462 1091 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 BRD3Q15059 726 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 C15orf59Q2T9L4 293 aaPredicted RBP11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 TIGD5Q53EQ6 642 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 CCDC70Q6NSX1 233 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 TRNP1Q6NT89 227 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 DSTYKQ6XUX3 929 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 CCNI2Q6ZMN8 369 aaPredicted RBP11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 ECHDC2Q86YB7 292 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 ZNF280BQ86YH2 543 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 HACE1Q8IYU2 909 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 C1orf54Q8WWF1 131 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 ATG4AQ8WYN0 398 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 FAXDC2Q96IV6 333 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 TSEN34Q9BSV6 310 aaKnown RBP11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 IP6K2Q9UHH9 426 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 NFU1Q9UMS0 254 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 GIT1Q9Y2X7 761 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 NBNO60934 754 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 RARAP10276 462 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 CTNNA2P26232 953 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 PNPLA4P41247 253 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 TNNT3P45378 269 aaPredicted RBP11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 CCL23P55773 120 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 TUBB4BP68371 445 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 GPNMBQ14956 572 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 ARHGEF6Q15052 776 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 UPP1Q16831 310 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 FAM182AQ5T1J6 154 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 TTC27Q6P3X3 843 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 CTU1Q7Z7A3 348 aaKnown RBP11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 MRPL10Q7Z7H8 261 aaKnown RBP11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 PRELID2Q8N945 189 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 SLC43A3Q8NBI5 491 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 CASKIN2Q8WXE0 1202 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 RHOBTB2Q9BYZ6 727 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 DPH5Q9H2P9 285 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 DDX43Q9NXZ2 648 aaKnown RBP11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 HCSTQ9UBK5 93 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 HESX1Q9UBX0 185 aa11.47□□□□□ -0.57
SNRPA1-211ENST00000560433 TARSL2A2RTX5 802 aaKnown RBP11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 SIGLEC16A6NMB1 481 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 RALAP11233 206 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 CCL5P13501 91 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 IL1R2P27930 398 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 FLT3P36888 993 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 SLC1A1P43005 524 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 GATMP50440 423 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 ATP11AP98196 1134 aa11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 SMC1AQ14683 1233 aaKnown RBP11.46□□□□□ -0.57
SNRPA1-211ENST00000560433 TCTN1Q2MV58 587 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms