RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 MCF2P10911 925 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 CYP11B2P19099 503 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 HOXD12P35452 270 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 PRPHP41219 470 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 CEBPZQ03701 1054 aaKnown RBP10.04□□□□□ -0.8
SMAD3-215ENST00000560424 FAM160A1Q05DH4 1040 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 MYBPC2Q14324 1141 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 TRIP6Q15654 476 aaKnown RBP10.04□□□□□ -0.8
SMAD3-215ENST00000560424 DUOXA1Q1HG43 343 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 C2orf27AQ580R0 203 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 CAVIN1Q6NZI2 390 aaKnown RBP10.04□□□□□ -0.8
SMAD3-215ENST00000560424 RBM43Q6ZSC3 357 aaKnown RBP10.04□□□□□ -0.8
SMAD3-215ENST00000560424 RASSF3Q86WH2 238 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 PGBD3Q8N328 593 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 ERMNQ8TAM6 284 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 WHAMMQ8TF30 809 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 MRPS31Q92665 395 aaKnown RBP10.04□□□□□ -0.8
SMAD3-215ENST00000560424 KIFAP3Q92845 792 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 ATP2A3Q93084 1043 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 ECT2Q9H8V3 914 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 TUFT1Q9NNX1 390 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 POLMQ9NP87 494 aaPredicted RBP10.04□□□□□ -0.8
SMAD3-215ENST00000560424 DUS2Q9NX74 493 aaKnown RBP10.04□□□□□ -0.8
SMAD3-215ENST00000560424 HSFX1Q9UBD0 423 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 MBD1Q9UIS9 605 aaPredicted RBP10.04□□□□□ -0.8
SMAD3-215ENST00000560424 FBXO2Q9UK22 296 aaPredicted RBP10.04□□□□□ -0.8
SMAD3-215ENST00000560424 APOBEC2Q9Y235 224 aaKnown RBP10.04□□□□□ -0.8
SMAD3-215ENST00000560424 HPSEQ9Y251 543 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 CCL26Q9Y258 94 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.04□□□□□ -0.8
SMAD3-215ENST00000560424 ZNF638Q14966 1978 aaKnown RBP10.04□□□□□ -0.8
SMAD3-215ENST00000560424 PCNX2A6NKB5 2137 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 LOC400499M0QZD8 3231 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 CITO14578 2027 aa10.04□□□□□ -0.8
SMAD3-215ENST00000560424 NBEAQ8NFP9 2946 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 FAM205CA6NFA0 338 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 AP5Z1O43299 807 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 XPOTO43592 962 aaKnown RBP10.03□□□□□ -0.8
SMAD3-215ENST00000560424 VNN2O95498 520 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 SYPP08247 313 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 FTH1P19P0C7X4 201 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 ODC1P11926 461 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 PTGER3P43115 390 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 MATR3P43243 847 aaKnown RBP eCLIP10.03□□□□□ -0.8
SMAD3-215ENST00000560424 FAM193AP78312 1265 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 GSE1Q14687 1217 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 MTF1Q14872 753 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 CRY1Q16526 586 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 ZSCAN23Q3MJ62 389 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 SLC39A12Q504Y0 691 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 RESP18Q5W5W9 173 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 NAIF1Q69YI7 327 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-215ENST00000560424 MPZL3Q6UWV2 235 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 CCDC73Q6ZRK6 1079 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 FMR1NBQ8N0W7 255 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-215ENST00000560424 MINDY1Q8N5J2 469 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 CCDC33Q8N5R6 958 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 C4orf32Q8N8J7 132 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 GIPC2Q8TF65 315 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 RLN3Q8WXF3 142 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 ADAMTS14Q8WXS8 1223 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 USP13Q92995 863 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-215ENST00000560424 TIGD1Q96MW7 591 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 UBL7Q96S82 380 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-215ENST00000560424 ACO2Q99798 780 aaKnown RBP10.03□□□□□ -0.8
SMAD3-215ENST00000560424 TMEM74BQ9NUR3 256 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 TUBGCP4Q9UGJ1 667 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 MMP17Q9ULZ9 603 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 TBX20Q9UMR3 447 aa10.03□□□□□ -0.8
SMAD3-215ENST00000560424 CACNA1EQ15878 2313 aa10.02□□□□□ -0.8
SMAD3-215ENST00000560424 CAPNS1P04632 268 aa10.02□□□□□ -0.81
SMAD3-215ENST00000560424 SERPINF2P08697 491 aa10.02□□□□□ -0.81
SMAD3-215ENST00000560424 DMP1Q13316 513 aaPredicted RBP10.02□□□□□ -0.81
SMAD3-215ENST00000560424 SPDYCQ5MJ68 293 aa10.02□□□□□ -0.81
SMAD3-215ENST00000560424 SHC4Q6S5L8 630 aa10.02□□□□□ -0.81
SMAD3-215ENST00000560424 CCNI2Q6ZMN8 369 aaPredicted RBP10.02□□□□□ -0.81
SMAD3-215ENST00000560424 CATSPER3Q86XQ3 398 aa10.02□□□□□ -0.81
SMAD3-215ENST00000560424 TTC9BQ8N6N2 239 aa10.02□□□□□ -0.81
SMAD3-215ENST00000560424 PNPLA1Q8N8W4 532 aa10.02□□□□□ -0.81
SMAD3-215ENST00000560424 USP33Q8TEY7 942 aa10.02□□□□□ -0.81
SMAD3-215ENST00000560424 OSCP1Q8WVF1 389 aa10.02□□□□□ -0.81
SMAD3-215ENST00000560424 PYM1Q9BRP8 204 aaKnown RBP10.02□□□□□ -0.81
SMAD3-215ENST00000560424 IL21Q9HBE4 155 aa10.02□□□□□ -0.81
SMAD3-215ENST00000560424 FSCN3Q9NQT6 498 aa10.02□□□□□ -0.81
SMAD3-215ENST00000560424 PILRBQ9UKJ0 227 aa10.02□□□□□ -0.81
SMAD3-215ENST00000560424 MAGED2Q9UNF1 606 aaPredicted RBP10.02□□□□□ -0.81
SMAD3-215ENST00000560424 FREM2Q5SZK8 3169 aa10.02□□□□□ -0.81
SMAD3-215ENST00000560424 WNT7AO00755 349 aa10.01□□□□□ -0.81
SMAD3-215ENST00000560424 ARHGAP33O14559 1287 aa10.01□□□□□ -0.81
SMAD3-215ENST00000560424 SH3BP5O60239 455 aa10.01□□□□□ -0.81
SMAD3-215ENST00000560424 MED24O75448 989 aa10.01□□□□□ -0.81
SMAD3-215ENST00000560424 PRB1P04280 392 aa10.01□□□□□ -0.81
SMAD3-215ENST00000560424 CKMP06732 381 aa10.01□□□□□ -0.81
SMAD3-215ENST00000560424 SPATA31C1P0DKV0 1188 aa10.01□□□□□ -0.81
SMAD3-215ENST00000560424 ATF6P18850 670 aa10.01□□□□□ -0.81
SMAD3-215ENST00000560424 TYMPP19971 482 aa10.01□□□□□ -0.81
SMAD3-215ENST00000560424 ITPKAP23677 461 aa10.01□□□□□ -0.81
SMAD3-215ENST00000560424 NMT1P30419 496 aaKnown RBP10.01□□□□□ -0.81
SMAD3-215ENST00000560424 LONP1P36776 959 aaKnown RBP10.01□□□□□ -0.81
SMAD3-215ENST00000560424 P2RY2P41231 377 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms