RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 IFRD2Q12894 506 aaPredicted RBP9.11□□□□□ -0.95
USP3-217ENST00000560070 TEAD2Q15562 447 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 MAPRE1Q15691 268 aaKnown RBP9.11□□□□□ -0.95
USP3-217ENST00000560070 STX1AQ16623 288 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 PARM1Q6UWI2 310 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 RTL10Q7L3V2 364 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 ITIH5Q86UX2 942 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 ARHGEF19Q8IW93 802 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 PLCD3Q8N3E9 789 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 TTC16Q8NEE8 873 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 SPATA18Q8TC71 538 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 C2orf15Q8WU43 125 aaKnown RBP9.11□□□□□ -0.95
USP3-217ENST00000560070 FGF13Q92913 245 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 KAT5Q92993 513 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 JAKMIP2Q96AA8 810 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 TNIP3Q96KP6 325 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 ZSWIM3Q96MP5 696 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 RPP25Q9BUL9 199 aaKnown RBP9.11□□□□□ -0.95
USP3-217ENST00000560070 BCO2Q9BYV7 579 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 ELOVL4Q9GZR5 314 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 INTS2Q9H0H0 1204 aaKnown RBP9.11□□□□□ -0.95
USP3-217ENST00000560070 THAP9Q9H5L6 903 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 SLITRK6Q9H5Y7 841 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 CYP3A43Q9HB55 503 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 CISHQ9NSE2 258 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 FANCLQ9NW38 375 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.11□□□□□ -0.95
USP3-217ENST00000560070 NFE2L3Q9Y4A8 694 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 PCDHB4Q9Y5E5 795 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 MYO7AQ13402 2215 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 PLXNA4Q9HCM2 1894 aa9.11□□□□□ -0.95
USP3-217ENST00000560070 COL6A3P12111 3177 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 MYH15Q9Y2K3 1946 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 FAM86C2PA6NEL3 165 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 KCNJ18B7U540 433 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 F8VP50 259 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 MOSPD3O75425 235 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 AP1G2O75843 785 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 ABL1P00519 1130 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 SLC9A1P19634 815 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 ANXA13P27216 316 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 MAP3K7CLP57077 242 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 CUL2Q13617 745 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 KCNJ12Q14500 433 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 ANO6Q4KMQ2 910 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 STXBP5Q5T5C0 1151 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 GPR158Q5T848 1215 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 GJB7Q6PEY0 223 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 FOXR2Q6PJQ5 311 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 RBM43Q6ZSC3 357 aaKnown RBP9.1□□□□□ -0.95
USP3-217ENST00000560070 PAQR9Q6ZVX9 377 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 TMC8Q8IU68 726 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 FAM114A1Q8IWE2 563 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 NPAS3Q8IXF0 933 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 ZDHHC14Q8IZN3 488 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 CRYBG2Q8N1P7 616 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 PPM1KQ8N3J5 372 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 SLC44A3Q8N4M1 653 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 SHKBP1Q8TBC3 707 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 ENOX1Q8TC92 643 aaKnown RBP9.1□□□□□ -0.95
USP3-217ENST00000560070 SLC2A14Q8TDB8 520 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 WHAMMQ8TF30 809 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 PSMG2Q969U7 264 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 CYFIP2Q96F07 1278 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 TMEM176AQ96HP8 235 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 NT5C1BQ96P26 610 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 KCNK16Q96T55 309 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 KXD1Q9BQD3 176 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 TUBGCP2Q9BSJ2 902 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 NT5C1AQ9BXI3 368 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 LRRC3Q9BY71 257 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 VPS16Q9H269 839 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 KCNK12Q9HB15 430 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 UBE2TQ9NPD8 197 aaPredicted RBP9.1□□□□□ -0.95
USP3-217ENST00000560070 TAB2Q9NYJ8 693 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 USTQ9Y2C2 406 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 COQ4Q9Y3A0 265 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 ASB3Q9Y575 518 aa9.1□□□□□ -0.95
USP3-217ENST00000560070 SYCE3A1L190 88 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 DCXO43602 365 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 NARSO43776 548 aaKnown RBP9.09□□□□□ -0.95
USP3-217ENST00000560070 CILPO75339 1184 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 BEST1O76090 585 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 PAPLNO95428 1278 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 CSH1P0DML2 217 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 CSH2P0DML3 217 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 CD19P15391 556 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 HMGA1P17096 107 aaKnown RBP9.09□□□□□ -0.95
USP3-217ENST00000560070 CDK11BP21127 795 aaKnown RBP9.09□□□□□ -0.95
USP3-217ENST00000560070 USP8P40818 1118 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 VIPR2P41587 438 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 MARSP56192 900 aaKnown RBP9.09□□□□□ -0.95
USP3-217ENST00000560070 ARHGAP44Q17R89 818 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 CFAP221Q4G0U5 840 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 VWA3BQ502W6 1294 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 FAM78AQ5JUQ0 283 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 PRSS36Q5K4E3 855 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 PPP1R26Q5T8A7 1209 aaPredicted RBP9.09□□□□□ -0.95
USP3-217ENST00000560070 TANGO2Q6ICL3 276 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 PHLDB3Q6NSJ2 640 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms