RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 PCDHB8Q9UN66 801 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 XIRP2A4UGR9 3374 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 SF3B1O75533 1304 aaKnown RBP eCLIP12.31□□□□□ -0.44
TM2D3-208ENST00000559891 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.31□□□□□ -0.44
TM2D3-208ENST00000559891 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.31□□□□□ -0.44
TM2D3-208ENST00000559891 CLDN5O00501 218 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 NDUFA10O95299 355 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 CYP11A1P05108 521 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 MMEP08473 750 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 P4HA1P13674 534 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 CCDC130P13994 396 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 WARSP23381 471 aaKnown RBP12.31□□□□□ -0.44
TM2D3-208ENST00000559891 BMP8BP34820 402 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 BMPR1AP36894 532 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 ERVFC1P60507 584 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 CAMK1Q14012 370 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 ASIC2Q16515 512 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 OVOS1Q6IE37 1185 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 ENOSF1Q7L5Y1 443 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 VPS52Q8N1B4 723 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 TMEM169Q96HH4 297 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 TMEM176AQ96HP8 235 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 PCDHB18PQ96TA0 734 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 SNX25Q9H3E2 840 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 TMEM51Q9NW97 253 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 GTF3C4Q9UKN8 822 aa12.31□□□□□ -0.44
TM2D3-208ENST00000559891 COLQQ9Y215 455 aaPredicted RBP12.31□□□□□ -0.44
TM2D3-208ENST00000559891 EPN1Q9Y6I3 576 aaPredicted RBP12.31□□□□□ -0.44
TM2D3-208ENST00000559891 GRM6O15303 877 aa12.3□□□□□ -0.44
TM2D3-208ENST00000559891 RHOXF2BP0C7M4 288 aa12.3□□□□□ -0.44
TM2D3-208ENST00000559891 CD19P15391 556 aa12.3□□□□□ -0.44
TM2D3-208ENST00000559891 RFX1P22670 979 aa12.3□□□□□ -0.44
TM2D3-208ENST00000559891 HNRNPH3P31942 346 aaKnown RBP12.3□□□□□ -0.44
TM2D3-208ENST00000559891 EIF4A3P38919 411 aaKnown RBP12.3□□□□□ -0.44
TM2D3-208ENST00000559891 GYS2P54840 703 aa12.3□□□□□ -0.44
TM2D3-208ENST00000559891 ARPP19P56211 112 aa12.3□□□□□ -0.44
TM2D3-208ENST00000559891 YWHAHQ04917 246 aaPredicted RBP12.3□□□□□ -0.44
TM2D3-208ENST00000559891 KLHL30Q0D2K2 578 aa12.3□□□□□ -0.44
TM2D3-208ENST00000559891 MEA1Q16626 185 aa12.3□□□□□ -0.44
TM2D3-208ENST00000559891 ZNF662Q6ZS27 426 aa12.3□□□□□ -0.44
TM2D3-208ENST00000559891 PASD1Q8IV76 773 aa12.3□□□□□ -0.44
TM2D3-208ENST00000559891 LNX1Q8TBB1 728 aaPredicted RBP12.3□□□□□ -0.44
TM2D3-208ENST00000559891 RIN2Q8WYP3 895 aaPredicted RBP12.3□□□□□ -0.44
TM2D3-208ENST00000559891 HEXIM2Q96MH2 286 aaKnown RBP12.3□□□□□ -0.44
TM2D3-208ENST00000559891 RHOXF2Q9BQY4 288 aa12.3□□□□□ -0.44
TM2D3-208ENST00000559891 SYT11Q9BT88 431 aa12.3□□□□□ -0.44
TM2D3-208ENST00000559891 TMEM30AQ9NV96 361 aa12.3□□□□□ -0.44
TM2D3-208ENST00000559891 CWC15Q9P013 229 aaKnown RBP12.3□□□□□ -0.44
TM2D3-208ENST00000559891 TFR2Q9UP52 801 aa12.3□□□□□ -0.44
TM2D3-208ENST00000559891 REXO2Q9Y3B8 237 aaKnown RBP12.3□□□□□ -0.44
TM2D3-208ENST00000559891 PCDHB12Q9Y5F1 795 aa12.3□□□□□ -0.44
TM2D3-208ENST00000559891 GNA15P30679 374 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 IRS1P35568 1242 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 LMAN1P49257 510 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 CACNA2D1P54289 1103 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 MRPL58Q14197 206 aaKnown RBP12.29□□□□□ -0.44
TM2D3-208ENST00000559891 CASP8Q14790 479 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 C2CD6Q53TS8 623 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 TDRD12Q587J7 1177 aaKnown RBP12.29□□□□□ -0.44
TM2D3-208ENST00000559891 PPP1R26Q5T8A7 1209 aaPredicted RBP12.29□□□□□ -0.44
TM2D3-208ENST00000559891 PAQR9Q6ZVX9 377 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 ZNF606Q8WXB4 792 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 TTPALQ9BTX7 342 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 NT5C1AQ9BXI3 368 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 CHST7Q9NS84 486 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 TAS2R14Q9NYV8 317 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 PCDHA11Q9Y5I1 949 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 ZNF263O14978 683 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 THAP12O43422 761 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 TRAPPC3O43617 180 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 OAZ2O95190 189 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 ACTN2P35609 894 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 FMO1Q01740 532 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 GFPT1Q06210 699 aaPredicted RBP12.29□□□□□ -0.44
TM2D3-208ENST00000559891 MDH1BQ5I0G3 518 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 TTC9BQ8N6N2 239 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 NOA1Q8NC60 698 aaKnown RBP12.29□□□□□ -0.44
TM2D3-208ENST00000559891 STKLD1Q8NE28 680 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 UBA3Q8TBC4 463 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 FAM71BQ8TC56 605 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 PGLYRP2Q96PD5 576 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 SYT15Q9BQS2 421 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 NHEJ1Q9H9Q4 299 aaPredicted RBP12.29□□□□□ -0.44
TM2D3-208ENST00000559891 VPS18Q9P253 973 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 ADAMTS1Q9UHI8 967 aa12.29□□□□□ -0.44
TM2D3-208ENST00000559891 A0A087X0T9 212 aa12.28□□□□□ -0.44
TM2D3-208ENST00000559891 HIDE1A8MVS5 230 aa12.28□□□□□ -0.44
TM2D3-208ENST00000559891 DDX3XO00571 662 aaKnown RBP eCLIP12.28□□□□□ -0.44
TM2D3-208ENST00000559891 BEST1O76090 585 aa12.28□□□□□ -0.44
TM2D3-208ENST00000559891 SOD2P04179 222 aa12.28□□□□□ -0.44
TM2D3-208ENST00000559891 FAM228BP0C875 321 aa12.28□□□□□ -0.44
TM2D3-208ENST00000559891 FERP16591 822 aa12.28□□□□□ -0.44
TM2D3-208ENST00000559891 PTPN1P18031 435 aaKnown RBP12.28□□□□□ -0.44
TM2D3-208ENST00000559891 TYMPP19971 482 aa12.28□□□□□ -0.44
TM2D3-208ENST00000559891 ADORA2BP29275 332 aa12.28□□□□□ -0.44
TM2D3-208ENST00000559891 CYP27A1Q02318 531 aa12.28□□□□□ -0.44
TM2D3-208ENST00000559891 ASTE1Q2TB18 679 aaPredicted RBP12.28□□□□□ -0.44
TM2D3-208ENST00000559891 CTXN3Q4LDR2 81 aa12.28□□□□□ -0.44
TM2D3-208ENST00000559891 DDX53Q86TM3 631 aaKnown RBP12.28□□□□□ -0.44
TM2D3-208ENST00000559891 TMEM86AQ8N2M4 240 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms