RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 SNTG2Q9NY99 539 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 EFR3BQ9Y2G0 817 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 CYP2C9P11712 490 aa16.79■□□□□ 0.28
USP8-208ENST00000559329 ATF7P17544 494 aaPredicted RBP16.79■□□□□ 0.28
USP8-208ENST00000559329 IL1R2P27930 398 aa16.79■□□□□ 0.28
USP8-208ENST00000559329 MAGOHP61326 146 aaKnown RBP16.79■□□□□ 0.28
USP8-208ENST00000559329 PPP2R2AP63151 447 aa16.79■□□□□ 0.28
USP8-208ENST00000559329 LMNB2Q03252 620 aa16.79■□□□□ 0.28
USP8-208ENST00000559329 NOTUMQ6P988 496 aa16.79■□□□□ 0.28
USP8-208ENST00000559329 LENG1Q96BZ8 264 aaPredicted RBP16.79■□□□□ 0.28
USP8-208ENST00000559329 ACSF2Q96CM8 615 aaPredicted RBP16.79■□□□□ 0.28
USP8-208ENST00000559329 OSMRQ99650 979 aa16.79■□□□□ 0.28
USP8-208ENST00000559329 DNPEPQ9ULA0 475 aa16.79■□□□□ 0.28
USP8-208ENST00000559329 PDCD11Q14690 1871 aaKnown RBP16.79■□□□□ 0.28
USP8-208ENST00000559329 SCN1AP35498 2009 aa16.79■□□□□ 0.28
USP8-208ENST00000559329 LRRD1A4D1F6 860 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 PPEF2O14830 753 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 PFKMP08237 780 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 KRT7P08729 469 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 ADCY8P40145 1251 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 IRX5P78411 483 aaPredicted RBP16.78■□□□□ 0.28
USP8-208ENST00000559329 MYO1EQ12965 1108 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 BYSLQ13895 437 aaKnown RBP16.78■□□□□ 0.28
USP8-208ENST00000559329 OASLQ15646 514 aaKnown RBP16.78■□□□□ 0.28
USP8-208ENST00000559329 TNFAIP8L3Q5GJ75 292 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 KAZNQ674X7 775 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 ZNF365Q70YC5 407 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 CROCCP2Q86T23 111 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 RASAL3Q86YV0 1011 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 EMC1Q8N766 993 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 BBOF1Q8ND07 529 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 NKD2Q969F2 451 aaPredicted RBP16.78■□□□□ 0.28
USP8-208ENST00000559329 NT5C1AQ9BXI3 368 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 SYNCQ9H7C4 482 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 CNTN3Q9P232 1028 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 BCCIPQ9P287 314 aaKnown RBP eCLIP16.78■□□□□ 0.28
USP8-208ENST00000559329 DRG1Q9Y295 367 aaKnown RBP16.78■□□□□ 0.28
USP8-208ENST00000559329 PSEN2P49810 448 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 ACAP1Q15027 740 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 PTGISQ16647 500 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 HIBCHQ6NVY1 386 aaPredicted RBP16.78■□□□□ 0.28
USP8-208ENST00000559329 RELL1Q8IUW5 271 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 ALLCQ8N6M5 410 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 LRRC52Q8N7C0 313 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 BCAS4Q8TDM0 211 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 PPP1R13LQ8WUF5 828 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 TUBGCP4Q9UGJ1 667 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 ANAPC5Q9UJX4 755 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 TSPAN16Q9UKR8 245 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 GINS2Q9Y248 185 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 NME7Q9Y5B8 376 aa16.78■□□□□ 0.28
USP8-208ENST00000559329 AXLP30530 894 aa16.77■□□□□ 0.28
USP8-208ENST00000559329 VCPP55072 806 aaKnown RBP16.77■□□□□ 0.28
USP8-208ENST00000559329 HUNKP57058 714 aa16.77■□□□□ 0.28
USP8-208ENST00000559329 STILQ15468 1287 aa16.77■□□□□ 0.28
USP8-208ENST00000559329 CCL14Q16627 93 aa16.77■□□□□ 0.28
USP8-208ENST00000559329 PKDCCQ504Y2 493 aa16.77■□□□□ 0.28
USP8-208ENST00000559329 CCDC25Q86WR0 208 aa16.77■□□□□ 0.28
USP8-208ENST00000559329 SLC35B2Q8TB61 432 aa16.77■□□□□ 0.28
USP8-208ENST00000559329 UBA3Q8TBC4 463 aa16.77■□□□□ 0.28
USP8-208ENST00000559329 CCHCR1Q8TD31 782 aa16.77■□□□□ 0.28
USP8-208ENST00000559329 TMEM40Q8WWA1 233 aa16.77■□□□□ 0.28
USP8-208ENST00000559329 MRPL45Q9BRJ2 306 aaKnown RBP16.77■□□□□ 0.28
USP8-208ENST00000559329 EPN3Q9H201 632 aa16.77■□□□□ 0.28
USP8-208ENST00000559329 GJD2Q9UKL4 321 aa16.77■□□□□ 0.28
USP8-208ENST00000559329 HES2Q9Y543 173 aa16.77■□□□□ 0.28
USP8-208ENST00000559329 HOXC8P31273 242 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 VPS41P49754 854 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 HADHQ16836 314 aaKnown RBP16.76■□□□□ 0.27
USP8-208ENST00000559329 ZFYVE27Q5T4F4 411 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 C6orf118Q5T5N4 469 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 IZUMO3Q5VZ72 239 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 MFSD5Q6N075 450 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 C17orf99Q6UX52 265 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 GLIS1Q8NBF1 620 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 IPO4Q8TEX9 1081 aaKnown RBP16.76■□□□□ 0.27
USP8-208ENST00000559329 DDX23Q9BUQ8 820 aaKnown RBP16.76■□□□□ 0.27
USP8-208ENST00000559329 ADAM7Q9H2U9 754 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 NXF3Q9H4D5 531 aaKnown RBP16.76■□□□□ 0.27
USP8-208ENST00000559329 Q9Y3F1 56 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 MANSC4A6NHS7 340 aaPredicted RBP16.76■□□□□ 0.27
USP8-208ENST00000559329 RECQL4O94761 1208 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 TTC4O95801 387 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 ITGAVP06756 1048 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 KDELR1P24390 212 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 CPT1AP50416 773 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 ZNF143P52747 638 aaPredicted RBP16.76■□□□□ 0.27
USP8-208ENST00000559329 YARSP54577 528 aaKnown RBP16.76■□□□□ 0.27
USP8-208ENST00000559329 SNX17Q15036 470 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 SMTNL2Q2TAL5 461 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 XKR4Q5GH76 650 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 TRNP1Q6NT89 227 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 BBS12Q6ZW61 710 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 PRUNE1Q86TP1 453 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 C12orf29Q8N999 325 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 BEST2Q8NFU1 509 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 CMASQ8NFW8 434 aaPredicted RBP16.76■□□□□ 0.27
USP8-208ENST00000559329 EPS8L3Q8TE67 593 aaKnown RBP16.76■□□□□ 0.27
USP8-208ENST00000559329 DNAJB3Q8WWF6 145 aa16.76■□□□□ 0.27
USP8-208ENST00000559329 C18orf25Q96B23 403 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms