RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CCDC130P13994 396 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 HMGA1P17096 107 aaKnown RBP12.19□□□□□ -0.46
SNX1-204ENST00000559061 ZNF132P52740 706 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 EPHA5P54756 1037 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 TSPY1Q01534 308 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 MTMR3Q13615 1198 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 TPD52L1Q16890 204 aaPredicted RBP12.19□□□□□ -0.46
SNX1-204ENST00000559061 SKOR2Q2VWA4 1001 aaPredicted RBP12.19□□□□□ -0.46
SNX1-204ENST00000559061 TJAP1Q5JTD0 557 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 CCDC149Q6ZUS6 474 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 RRAGAQ7L523 313 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 GRASPQ7Z6J2 395 aaPredicted RBP12.19□□□□□ -0.46
SNX1-204ENST00000559061 TMEM150AQ86TG1 271 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 LUZP1Q86V48 1076 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 UNC93AQ86WB7 457 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 CREBRFQ8IUR6 639 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 DCP1BQ8IZD4 617 aaKnown RBP12.19□□□□□ -0.46
SNX1-204ENST00000559061 ITFG1Q8TB96 612 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 SPPL2BQ8TCT7 592 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 C2orf15Q8WU43 125 aaKnown RBP12.19□□□□□ -0.46
SNX1-204ENST00000559061 TCEAL4Q96EI5 215 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 FAXDC2Q96IV6 333 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 GPR88Q9GZN0 384 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 IL21Q9HBE4 155 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 ABCB6Q9NP58 842 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 R3HCC1Q9Y3T6 440 aaKnown RBP12.19□□□□□ -0.46
SNX1-204ENST00000559061 PCDHB5Q9Y5E4 795 aa12.19□□□□□ -0.46
SNX1-204ENST00000559061 NCANO14594 1321 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 LRRC10BA6NIK2 292 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 BECN2A8MW95 431 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 C2CD4DB7Z1M9 353 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 TADA3O75528 432 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 NOL4O94818 638 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 LETM1O95202 739 aaPredicted RBP12.18□□□□□ -0.46
SNX1-204ENST00000559061 PRKCSHP14314 528 aaPredicted RBP12.18□□□□□ -0.46
SNX1-204ENST00000559061 KCNA4P22459 653 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 SP100P23497 879 aaPredicted RBP12.18□□□□□ -0.46
SNX1-204ENST00000559061 BDNFP23560 247 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 ZNF165P49910 485 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 COPB1P53618 953 aaKnown RBP12.18□□□□□ -0.46
SNX1-204ENST00000559061 PTPN21Q16825 1174 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 DDR2Q16832 855 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 PUS10Q3MIT2 529 aaKnown RBP12.18□□□□□ -0.46
SNX1-204ENST00000559061 MGAT5BQ3V5L5 792 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 RTL10Q7L3V2 364 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 FAM35AQ86V20 835 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 FAM114A1Q8IWE2 563 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 ADAMTS19Q8TE59 1207 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 KHSRPQ92945 711 aaKnown RBP eCLIP12.18□□□□□ -0.461e-7■□□□□ 8
SNX1-204ENST00000559061 FUBP3Q96I24 572 aaKnown RBP eCLIP12.18□□□□□ -0.46
SNX1-204ENST00000559061 NT5C1BQ96P26 610 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 MYADMQ96S97 322 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 SEPT5Q99719 369 aaPredicted RBP12.18□□□□□ -0.46
SNX1-204ENST00000559061 PHF7Q9BWX1 381 aaPredicted RBP12.18□□□□□ -0.46
SNX1-204ENST00000559061 IMPG2Q9BZV3 1241 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 VPS16Q9H269 839 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 FAM49BQ9NUQ9 324 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 CNTN6Q9UQ52 1028 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 SIK3Q9Y2K2 1263 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 KIF26AQ9ULI4 1882 aaPredicted RBP12.18□□□□□ -0.46
SNX1-204ENST00000559061 MYO16Q9Y6X6 1858 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 MYH10P35580 1976 aa12.18□□□□□ -0.46
SNX1-204ENST00000559061 NUP210Q8TEM1 1887 aaPredicted RBP12.17□□□□□ -0.46
SNX1-204ENST00000559061 LGALS16A8MUM7 142 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 HHLA1C9JL84 531 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 RHOP08100 348 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 PNMA6AP0CW24 399 aaPredicted RBP12.17□□□□□ -0.46
SNX1-204ENST00000559061 P4HA1P13674 534 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 CEBPBP17676 345 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 MTHFRP42898 656 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 MAGEA11P43364 429 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 USP46P62068 366 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 CYP27A1Q02318 531 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 GCNT1Q02742 428 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 SMARCB1Q12824 385 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 NFE2Q16621 373 aaPredicted RBP12.17□□□□□ -0.46
SNX1-204ENST00000559061 AAK1Q2M2I8 961 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 ZNF394Q53GI3 561 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 WDR44Q5JSH3 913 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 CES5AQ6NT32 575 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 CYP26C1Q6V0L0 522 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 GAREM2Q75VX8 874 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 ADHFE1Q8IWW8 467 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 SLC2A14Q8TDB8 520 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 GIPC2Q8TF65 315 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 TFAP2BQ92481 460 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 PSMG2Q969U7 264 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 KCNK16Q96T55 309 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 SMOQ99835 787 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 NAA15Q9BXJ9 866 aaKnown RBP12.17□□□□□ -0.46
SNX1-204ENST00000559061 GANQ9H2C0 597 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 ACP6Q9NPH0 428 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 AVENQ9NQS1 362 aaPredicted RBP12.17□□□□□ -0.46
SNX1-204ENST00000559061 DPP7Q9UHL4 492 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 COL4A2P08572 1712 aa12.17□□□□□ -0.46
SNX1-204ENST00000559061 F8VP50 259 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 TNFRSF10BO14763 440 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 TEX33O43247 280 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 CLSTN1O94985 981 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 LRG1P02750 347 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms