RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 DNAJC12Q9UKB3 198 aa18.56■□□□□ 0.56
TPM1-214ENST00000558544 FHOD1Q9Y613 1164 aa18.56■□□□□ 0.56
TPM1-214ENST00000558544 ZNF638Q14966 1978 aaKnown RBP18.56■□□□□ 0.56
TPM1-214ENST00000558544 CCDC195A0A1B0GUA6 201 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 CLDN5O00501 218 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 CCL16O15467 120 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 LRG1P02750 347 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 KRT5P13647 590 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 CCDC130P13994 396 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 HOXB8P17481 243 aaPredicted RBP18.55■□□□□ 0.56
TPM1-214ENST00000558544 CYP2F1P24903 491 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 UBASH3AP57075 661 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 UVSSAQ2YD98 709 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 TMEM176AQ96HP8 235 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 MED10Q9BTT4 135 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 B3GNT5Q9BYG0 378 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 DNAI2Q9GZS0 605 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 GANQ9H2C0 597 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 PLCB1Q9NQ66 1216 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 ZDHHC7Q9NXF8 308 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 IFNKQ9P0W0 207 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 CD207Q9UJ71 328 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 CDH22Q9UJ99 828 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 NOTCH4Q99466 2003 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 MYO16Q9Y6X6 1858 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 UNC80Q8N2C7 3258 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 EPHB6O15197 1021 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 NOL4O94818 638 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 HAPLN1P10915 354 aaPredicted RBP18.55■□□□□ 0.56
TPM1-214ENST00000558544 UCHL3P15374 230 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 BDNFP23560 247 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 TFF2Q03403 129 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 TWF1Q12792 350 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 RAPGEF1Q13905 1077 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 NR1I3Q14994 352 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 CFAP221Q4G0U5 840 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 RBBP8NLQ8NC74 664 aaPredicted RBP18.55■□□□□ 0.56
TPM1-214ENST00000558544 CMASQ8NFW8 434 aaPredicted RBP18.55■□□□□ 0.56
TPM1-214ENST00000558544 JAKMIP2Q96AA8 810 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 FUBP3Q96I24 572 aaKnown RBP eCLIP18.55■□□□□ 0.56
TPM1-214ENST00000558544 HEXIM2Q96MH2 286 aaKnown RBP18.55■□□□□ 0.56
TPM1-214ENST00000558544 ZNF518BQ9C0D4 1074 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 ABCB6Q9NP58 842 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 THEGQ9P2T0 379 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 HSFX1Q9UBD0 423 aa18.55■□□□□ 0.56
TPM1-214ENST00000558544 OBSL1O75147 1896 aa18.54■□□□□ 0.56
TPM1-214ENST00000558544 RNF225M0QZC1 329 aaPredicted RBP18.54■□□□□ 0.56
TPM1-214ENST00000558544 HNRNPA1P09651 372 aaKnown RBP eCLIP18.54■□□□□ 0.56
TPM1-214ENST00000558544 RFX1P22670 979 aa18.54■□□□□ 0.56
TPM1-214ENST00000558544 ADORA2BP29275 332 aa18.54■□□□□ 0.56
TPM1-214ENST00000558544 HOXA9P31269 272 aa18.54■□□□□ 0.56
TPM1-214ENST00000558544 TUFMP49411 452 aaKnown RBP18.54■□□□□ 0.56
TPM1-214ENST00000558544 GPR15P49685 360 aa18.54■□□□□ 0.56
TPM1-214ENST00000558544 ZNF132P52740 706 aa18.54■□□□□ 0.56
TPM1-214ENST00000558544 RTL10Q7L3V2 364 aa18.54■□□□□ 0.56
TPM1-214ENST00000558544 FAM35AQ86V20 835 aa18.54■□□□□ 0.56
TPM1-214ENST00000558544 SCN4BQ8IWT1 228 aa18.54■□□□□ 0.56
TPM1-214ENST00000558544 FUKQ8N0W3 1084 aa18.54■□□□□ 0.56
TPM1-214ENST00000558544 SMRP1Q8NCR6 262 aa18.54■□□□□ 0.56
TPM1-214ENST00000558544 NEK11Q8NG66 645 aa18.54■□□□□ 0.56
TPM1-214ENST00000558544 SLC2A14Q8TDB8 520 aa18.54■□□□□ 0.56
TPM1-214ENST00000558544 SHC3Q92529 594 aa18.54■□□□□ 0.56
TPM1-214ENST00000558544 ZNF707Q96C28 371 aaPredicted RBP18.54■□□□□ 0.56
TPM1-214ENST00000558544 NAA15Q9BXJ9 866 aaKnown RBP18.54■□□□□ 0.56
TPM1-214ENST00000558544 PRKD2Q9BZL6 878 aa18.54■□□□□ 0.56
TPM1-214ENST00000558544 S1PR5Q9H228 398 aa18.54■□□□□ 0.56
TPM1-214ENST00000558544 DENND4CQ5VZ89 1909 aa18.54■□□□□ 0.56
TPM1-214ENST00000558544 ATP8B3O60423 1300 aa18.53■□□□□ 0.56
TPM1-214ENST00000558544 CALCAP01258 141 aa18.53■□□□□ 0.56
TPM1-214ENST00000558544 PNMA6AP0CW24 399 aaPredicted RBP18.53■□□□□ 0.56
TPM1-214ENST00000558544 CD19P15391 556 aa18.53■□□□□ 0.56
TPM1-214ENST00000558544 ATF6P18850 670 aa18.53■□□□□ 0.56
TPM1-214ENST00000558544 USP8P40818 1118 aa18.53■□□□□ 0.56
TPM1-214ENST00000558544 ALDH1A3P47895 512 aa18.53■□□□□ 0.56
TPM1-214ENST00000558544 POLR2FP61218 127 aaKnown RBP18.53■□□□□ 0.56
TPM1-214ENST00000558544 PLD1Q13393 1074 aa18.53■□□□□ 0.56
TPM1-214ENST00000558544 PPP1R26Q5T8A7 1209 aaPredicted RBP18.53■□□□□ 0.56
TPM1-214ENST00000558544 PAQR9Q6ZVX9 377 aa18.53■□□□□ 0.56
TPM1-214ENST00000558544 SMG7Q92540 1137 aaKnown RBP18.53■□□□□ 0.56
TPM1-214ENST00000558544 CYFIP2Q96F07 1278 aa18.53■□□□□ 0.56
TPM1-214ENST00000558544 XPO4Q9C0E2 1151 aaKnown RBP18.53■□□□□ 0.56
TPM1-214ENST00000558544 ADAM7Q9H2U9 754 aa18.53■□□□□ 0.56
TPM1-214ENST00000558544 PIDD1Q9HB75 910 aa18.53■□□□□ 0.56
TPM1-214ENST00000558544 KRT82Q9NSB4 513 aa18.53■□□□□ 0.56
TPM1-214ENST00000558544 XYLBO75191 536 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 PAEPP09466 180 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 GRIK1P39086 918 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 MAGEA11P43364 429 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 CACNA2D1P54289 1103 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 ITIH3Q06033 890 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 DRAP1Q14919 205 aaPredicted RBP18.52■□□□□ 0.55
TPM1-214ENST00000558544 DDR2Q16832 855 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 LEXMQ3ZCV2 418 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 SGO2Q562F6 1265 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 SDHAF4Q5VUM1 108 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 CES5AQ6NT32 575 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 GPR149Q86SP6 731 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 STKLD1Q8NE28 680 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 GPR152Q8TDT2 470 aa18.52■□□□□ 0.55
TPM1-214ENST00000558544 GIPC2Q8TF65 315 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms