RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 TCHPQ9BT92 498 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 TARS2Q9BW92 718 aaKnown RBP7.33□□□□□ -1.24
LRRC28-207ENST00000558500 CAPN10Q9HC96 672 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 FSCN3Q9NQT6 498 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 PILRBQ9UKJ0 227 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 MMP17Q9ULZ9 603 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 ASCC3Q8N3C0 2202 aaKnown RBP7.33□□□□□ -1.24
LRRC28-207ENST00000558500 ASXL3Q9C0F0 2248 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 ARID2Q68CP9 1835 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 ANTXRLA6NF34 631 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 CCDC169A6NNP5 214 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 K7EQS6 105 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 WNT7AO00755 349 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 SH3BP5O60239 455 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 ALDH1A2O94788 518 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 F11P03951 625 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 PRB1P04280 392 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 SERPINF2P08697 491 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 ODC1P11926 461 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 HARSP12081 509 aaKnown RBP7.32□□□□□ -1.24
LRRC28-207ENST00000558500 HNRNPLP14866 589 aaKnown RBP eCLIP7.32□□□□□ -1.24
LRRC28-207ENST00000558500 HMGA1P17096 107 aaKnown RBP7.32□□□□□ -1.24
LRRC28-207ENST00000558500 CYP3A5P20815 502 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 ITPKAP23677 461 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 NPTX2P47972 431 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 IFNAR2P48551 515 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 SEC13P55735 322 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 NLRP12P59046 1061 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 STK3Q13188 491 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 DMP1Q13316 513 aaPredicted RBP7.32□□□□□ -1.24
LRRC28-207ENST00000558500 MTF1Q14872 753 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 ZNF77Q15935 545 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 DUOXA1Q1HG43 343 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 EML3Q32P44 896 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 MAP7D1Q3KQU3 841 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 MGAT5BQ3V5L5 792 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 SLC39A12Q504Y0 691 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 SEZ6Q53EL9 994 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 BMP2KLQ5H9B9 411 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 LMBRD2Q68DH5 695 aaPredicted RBP7.32□□□□□ -1.24
LRRC28-207ENST00000558500 MON1AQ86VX9 555 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 TTC30AQ86WT1 665 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 CCDC33Q8N5R6 958 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 FRMD1Q8N878 549 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 PNPLA1Q8N8W4 532 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 OR2I1PQ8NGU4 316 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 OR10T2Q8NGX3 314 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 WHAMMQ8TF30 809 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 MRPS31Q92665 395 aaKnown RBP7.32□□□□□ -1.24
LRRC28-207ENST00000558500 ATP2A3Q93084 1043 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 ZBTB45Q96K62 511 aaPredicted RBP7.32□□□□□ -1.24
LRRC28-207ENST00000558500 CAMK1GQ96NX5 476 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 UBL7Q96S82 380 aaPredicted RBP7.32□□□□□ -1.24
LRRC28-207ENST00000558500 TMEM134Q9H6X4 195 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 DNAAF2Q9NVR5 837 aaKnown RBP7.32□□□□□ -1.24
LRRC28-207ENST00000558500 DUS2Q9NX74 493 aaKnown RBP7.32□□□□□ -1.24
LRRC28-207ENST00000558500 ARHGAP28Q9P2N2 729 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 DKK4Q9UBT3 224 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 RABGEF1Q9UJ41 708 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 UBQLN1Q9UMX0 589 aaKnown RBP7.32□□□□□ -1.24
LRRC28-207ENST00000558500 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.32□□□□□ -1.24
LRRC28-207ENST00000558500 WNT6Q9Y6F9 365 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 CELSR3Q9NYQ7 3312 aa7.32□□□□□ -1.24
LRRC28-207ENST00000558500 STK36Q9NRP7 1315 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 BHMG1C9JSJ3 638 aaPredicted RBP7.31□□□□□ -1.24
LRRC28-207ENST00000558500 PPEF2O14830 753 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 C1QL1O75973 258 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 CDKL5O76039 1030 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 CXCL8P10145 99 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 RPA1P27694 616 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 KRT2P35908 639 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 OPRD1P41143 372 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 CDR1P51861 262 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 PEX3P56589 373 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 MRPS21P82921 87 aaKnown RBP7.31□□□□□ -1.24
LRRC28-207ENST00000558500 FAM160A1Q05DH4 1040 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 SPAG1Q07617 926 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 USP4Q13107 963 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 NR1H3Q13133 447 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 SLC14A1Q13336 389 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 BYSLQ13895 437 aaKnown RBP7.31□□□□□ -1.24
LRRC28-207ENST00000558500 ZBTB6Q15916 424 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 TOGARAM2Q6ZUX3 1019 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 RUFY3Q7L099 469 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 RABEPKQ7Z6M1 372 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 ERMNQ8TAM6 284 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 SPPL2BQ8TCT7 592 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 C2orf15Q8WU43 125 aaKnown RBP7.31□□□□□ -1.24
LRRC28-207ENST00000558500 CRELD1Q96HD1 420 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 SENP8Q96LD8 212 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 ZCWPW1Q9H0M4 648 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 TMEM60Q9H2L4 133 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 PLEKHA5Q9HAU0 1116 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 RBM19Q9Y4C8 960 aaKnown RBP7.31□□□□□ -1.24
LRRC28-207ENST00000558500 PCDHB9Q9Y5E1 797 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 MYO18BQ8IUG5 2567 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 UNC79Q9P2D8 2635 aa7.31□□□□□ -1.24
LRRC28-207ENST00000558500 PDCD11Q14690 1871 aaKnown RBP7.3□□□□□ -1.24
LRRC28-207ENST00000558500 SPTA1P02549 2419 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 PCNX2A6NKB5 2137 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms