RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 TEX2Q8IWB9 1127 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 SLC24A3Q9HC58 644 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 PCMTD2Q9NV79 361 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 NFS1Q9Y697 457 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 TBC1D12O60347 775 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 ELF3P78545 371 aaPredicted RBP16.19■□□□□ 0.18
AP4E1-202ENST00000558439 SUGP1Q8IWZ8 645 aaKnown RBP16.19■□□□□ 0.18
AP4E1-202ENST00000558439 CHST13Q8NET6 341 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 CRYGNQ8WXF5 182 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 CENPTQ96BT3 561 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 VCXQ9H320 206 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 MANSC1Q9H8J5 431 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 IFT122Q9HBG6 1241 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 VTNP04004 478 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 ENO1P06733 434 aaKnown RBP16.19■□□□□ 0.18
AP4E1-202ENST00000558439 ALDH5A1P51649 535 aaPredicted RBP16.19■□□□□ 0.18
AP4E1-202ENST00000558439 MORF4L2Q15014 288 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 NLRP9Q7RTR0 991 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 TRIM42Q8IWZ5 723 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 TTC1Q99614 292 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 SMARCAD1Q9H4L7 1026 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 GLI3P10071 1580 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 EGFRP00533 1210 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 EPHB1P54762 984 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 SPDYCQ5MJ68 293 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 DENND1BQ6P3S1 775 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 RPAINQ86UA6 219 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 MTDHQ86UE4 582 aaKnown RBP16.18■□□□□ 0.18
AP4E1-202ENST00000558439 CCDC125Q86Z20 511 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 KATNAL2Q8IYT4 538 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 RIBC1Q8N443 379 aaPredicted RBP16.18■□□□□ 0.18
AP4E1-202ENST00000558439 TLCD1Q96CP7 247 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 FIZ1Q96SL8 496 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 RSAD1Q9HA92 442 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 XPNPEP1Q9NQW7 623 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 FIS1Q9Y3D6 152 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 ECHS1P30084 290 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 RPA3P35244 121 aaPredicted RBP16.18■□□□□ 0.18
AP4E1-202ENST00000558439 HIRAP54198 1017 aaPredicted RBP16.18■□□□□ 0.18
AP4E1-202ENST00000558439 WDR49Q8IV35 697 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 SIX6OS1Q8N1H7 587 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 ARMC2Q8NEN0 867 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 GPR88Q9GZN0 384 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 HEY2Q9UBP5 337 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 USP18Q9UMW8 372 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 UBA1P22314 1058 aaKnown RBP16.18■□□□□ 0.18
AP4E1-202ENST00000558439 ACOT1Q86TX2 421 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 LMO3Q8TAP4 145 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 FBXO41Q8TF61 875 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 CKAP2Q8WWK9 683 aa16.18■□□□□ 0.18
AP4E1-202ENST00000558439 KLHL8Q9P2G9 620 aaPredicted RBP16.18■□□□□ 0.18
AP4E1-202ENST00000558439 CBX6O95503 412 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 GHRP10912 638 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 GPD1P21695 349 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 ADRA1DP25100 572 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 CDC25CP30307 473 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 ALDH18A1P54886 795 aaKnown RBP16.17■□□□□ 0.18
AP4E1-202ENST00000558439 MCL1Q07820 350 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 CAPSQ13938 189 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 BRSK2Q8IWQ3 736 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 NT5C1AQ9BXI3 368 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 PHLPP1O60346 1717 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 COL4A1P02462 1669 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 MROH7Q68CQ1 1323 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 CCNA1P78396 465 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 RBP5P82980 135 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 FASTKD3Q14CZ7 662 aaKnown RBP16.17■□□□□ 0.18
AP4E1-202ENST00000558439 MPZL3Q6UWV2 235 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 TCP10LQ8TDR4 215 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 RXFP2Q8WXD0 754 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 ZBTB10Q96DT7 871 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 VCPIP1Q96JH7 1222 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 SLITRK1Q96PX8 696 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 CYP4F11Q9HBI6 524 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 RXFP1Q9HBX9 757 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 ANKRD36CQ5JPF3 1778 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 ADGRA3Q8IWK6 1321 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 A0A087WZ62 844 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 ELK3P41970 407 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 PTPN11Q06124 597 aaPredicted RBP16.17■□□□□ 0.18
AP4E1-202ENST00000558439 PPP1R13LQ8WUF5 828 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 SPOCK2Q92563 424 aa16.17■□□□□ 0.18
AP4E1-202ENST00000558439 FDXACB1Q9BRP7 624 aaPredicted RBP16.17■□□□□ 0.18
AP4E1-202ENST00000558439 LIASO43766 372 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 PLA2G6O60733 806 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 LUC7L3O95232 432 aaKnown RBP16.16■□□□□ 0.18
AP4E1-202ENST00000558439 STAG3L1P0CL83 205 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 BMPR2Q13873 1038 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 ARID3BQ8IVW6 561 aaPredicted RBP16.16■□□□□ 0.18
AP4E1-202ENST00000558439 WDR75Q8IWA0 830 aaKnown RBP16.16■□□□□ 0.18
AP4E1-202ENST00000558439 NDUFAF2Q8N183 169 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 ZCCHC9Q8N567 271 aaKnown RBP16.16■□□□□ 0.18
AP4E1-202ENST00000558439 ATXN2LQ8WWM7 1075 aaKnown RBP16.16■□□□□ 0.18
AP4E1-202ENST00000558439 ZNF516Q92618 1163 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 COPS5Q92905 334 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 CCDC124Q96CT7 223 aaKnown RBP16.16■□□□□ 0.18
AP4E1-202ENST00000558439 PIH1D1Q9NWS0 290 aaKnown RBP16.16■□□□□ 0.18
AP4E1-202ENST00000558439 MYH1P12882 1939 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 GSTA1P08263 222 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 SLC12A2P55011 1212 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms