RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 PAFAH1B1P43034 410 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 ALDH1A3P47895 512 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 KCNC1P48547 511 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 MAPKAPK2P49137 400 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 RBM5P52756 815 aaKnown RBP eCLIP4.23□□□□□ -1.73
TDP1-217ENST00000557782 ERVFRD-1P60508 538 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 PSMC1P62191 440 aaKnown RBP4.23□□□□□ -1.73
TDP1-217ENST00000557782 SATB1Q01826 763 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 GALNT2Q10471 571 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 CDC16Q13042 620 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 CHAF1BQ13112 559 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 MAMLD1Q13495 774 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 RAB3GAP1Q15042 981 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 BTBD16Q32M84 506 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 PRAMEF14Q5SWL7 426 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 HECTD3Q5T447 861 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 TTC22Q5TAA0 569 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 SNX30Q5VWJ9 437 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 AFMIDQ63HM1 303 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 RINT1Q6NUQ1 792 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 ZC3H14Q6PJT7 736 aaKnown RBP4.23□□□□□ -1.73
TDP1-217ENST00000557782 ZDHHC24Q6UX98 284 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 SEM1Q6ZVN7 128 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 ZNF365Q70YC5 407 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 LRRC8DQ7L1W4 858 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 CPLX4Q7Z7G2 160 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 TEX11Q8IYF3 940 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 LILRA3Q8N6C8 439 aaPredicted RBP4.23□□□□□ -1.73
TDP1-217ENST00000557782 STPG3Q8N7X2 389 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 AFAP1L1Q8TED9 768 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 WDR60Q8WVS4 1066 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 KCNN1Q92952 543 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 CUL5Q93034 780 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 SPATA17Q96L03 361 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 MOGAT1Q96PD6 335 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 FAM83DQ9H4H8 585 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 PRDM13Q9H4Q3 707 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 EPS8L2Q9H6S3 715 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 ZWILCHQ9H900 591 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 GPR35Q9HC97 309 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 CWC25Q9NXE8 425 aaPredicted RBP4.23□□□□□ -1.73
TDP1-217ENST00000557782 JKAMPQ9P055 326 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 ZHX1Q9UKY1 873 aaPredicted RBP4.23□□□□□ -1.73
TDP1-217ENST00000557782 TMEM5Q9Y2B1 443 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 SNX8Q9Y5X2 465 aa4.23□□□□□ -1.73
TDP1-217ENST00000557782 hCG_1807616A0A1W2PRN6 198 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 PRSS29PA6NIE9 313 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 H7C0S8 307 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 NRP1O14786 923 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 KIAA0355O15063 1070 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 EFEMP2O95967 443 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 PIM1P11309 404 aaPredicted RBP4.22□□□□□ -1.73
TDP1-217ENST00000557782 PORP16435 677 aaPredicted RBP4.22□□□□□ -1.73
TDP1-217ENST00000557782 TGM1P22735 817 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 PSMA4P25789 261 aaKnown RBP4.22□□□□□ -1.73
TDP1-217ENST00000557782 KLRK1P26718 216 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 SERPINA4P29622 427 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 STAT5BP51692 787 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 ZNF135P52742 658 aaPredicted RBP4.22□□□□□ -1.73
TDP1-217ENST00000557782 RPP30P78346 268 aaKnown RBP4.22□□□□□ -1.73
TDP1-217ENST00000557782 OTUD7BQ6GQQ9 843 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 ANO7Q6IWH7 933 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 KLHL24Q6TFL4 600 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 RPTNQ6XPR3 784 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 USP37Q86T82 979 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 VSIG1Q86XK7 387 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 ADSSL1Q8N142 457 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 PLA2G15Q8NCC3 412 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 MDM1Q8TC05 714 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 SSH3Q8TE77 659 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 CREB3L4Q8TEY5 395 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 SCAMP4Q969E2 229 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 YME1L1Q96TA2 773 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 SPATA5L1Q9BVQ7 753 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 TINAGL1Q9GZM7 467 aaPredicted RBP4.22□□□□□ -1.73
TDP1-217ENST00000557782 VPS16Q9H269 839 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 BCAS3Q9H6U6 928 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 UNKLQ9H9P5 680 aaKnown RBP4.22□□□□□ -1.73
TDP1-217ENST00000557782 PCDH18Q9HCL0 1135 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 XPNPEP3Q9NQH7 507 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 DIAPH3Q9NSV4 1193 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 ARGLU1Q9NWB6 273 aaPredicted RBP4.22□□□□□ -1.73
TDP1-217ENST00000557782 ING3Q9NXR8 418 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 PLA2G3Q9NZ20 509 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 DAPP1Q9UN19 280 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 DNAJC16Q9Y2G8 782 aa4.22□□□□□ -1.73
TDP1-217ENST00000557782 IRS2Q9Y4H2 1338 aa4.21□□□□□ -1.73
TDP1-217ENST00000557782 VWA3AA6NCI4 1184 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 SAC3D1A6NKF1 404 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.21□□□□□ -1.74
TDP1-217ENST00000557782 H7C4K7 107 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 LCE2BO14633 110 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 PPP6R2O75170 966 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 GUCY1B2O75343 617 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 PIAS2O75928 621 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 KLHL18O94889 574 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 HAUS5O94927 633 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 HNRNPCP07910 306 aaKnown RBP eCLIP4.21□□□□□ -1.74
TDP1-217ENST00000557782 ALAS1P13196 640 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 ATP5JP18859 108 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms