RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 ZACNQ401N2 412 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 ARHGAP15Q53QZ3 475 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 INTS6LQ5JSJ4 861 aaKnown RBP8.9□□□□□ -0.98
PSEN1-223ENST00000557511 TDRD10Q5VZ19 366 aaKnown RBP8.9□□□□□ -0.98
PSEN1-223ENST00000557511 SASS6Q6UVJ0 657 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 LIAT1Q6ZQX7 453 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 SV2AQ7L0J3 742 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 FILIP1Q7Z7B0 1213 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 TTC39CQ8N584 583 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 ATAD1Q8NBU5 361 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 OR10T2Q8NGX3 314 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 NXPE3Q969Y0 559 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 ZNF707Q96C28 371 aaPredicted RBP8.9□□□□□ -0.98
PSEN1-223ENST00000557511 TNIP3Q96KP6 325 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 SYT15Q9BQS2 421 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 C1QTNF1Q9BXJ1 281 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 LMBRD1Q9NUN5 540 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 MAGEC2Q9UBF1 373 aaPredicted RBP8.9□□□□□ -0.98
PSEN1-223ENST00000557511 COL6A3P12111 3177 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 TRIM49BA6NDI0 452 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 SEC24AO95486 1093 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 HLA-DRAP01903 254 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 PDGFRBP09619 1106 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 HAPLN1P10915 354 aaPredicted RBP8.89□□□□□ -0.99
PSEN1-223ENST00000557511 MYL4P12829 197 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 ACAT1P24752 427 aaKnown RBP8.89□□□□□ -0.99
PSEN1-223ENST00000557511 YWHAEP62258 255 aaKnown RBP8.89□□□□□ -0.99
PSEN1-223ENST00000557511 DLG4P78352 724 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 CYP27A1Q02318 531 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 MTMR3Q13615 1198 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 PLA2G2CQ5R387 149 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 FOXR2Q6PJQ5 311 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 SCARA5Q6ZMJ2 495 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 MTSS1LQ765P7 747 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 FRMD5Q7Z6J6 570 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 FAM114A1Q8IWE2 563 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 SCN4BQ8IWT1 228 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 FBXL13Q8NEE6 735 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 CXorf38Q8TB03 319 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 PLEKHO2Q8TD55 490 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 EEF2KMTQ96G04 330 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 FUBP3Q96I24 572 aaKnown RBP eCLIP8.89□□□□□ -0.99
PSEN1-223ENST00000557511 FAM84AQ96KN4 292 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 TMEM209Q96SK2 561 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 PI4K2AQ9BTU6 479 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 GPR88Q9GZN0 384 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 SLITRK6Q9H5Y7 841 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 VRTNQ9H8Y1 702 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 ABCB6Q9NP58 842 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 EHD2Q9NZN4 543 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 IGSF9Q9P2J2 1179 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 DNMT3BQ9UBC3 853 aaKnown RBP8.89□□□□□ -0.99
PSEN1-223ENST00000557511 RWDD2AQ9UIY3 292 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 CDH22Q9UJ99 828 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 GTF3C4Q9UKN8 822 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 CDH7Q9ULB5 785 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 ATG2AQ2TAZ0 1938 aa8.89□□□□□ -0.99
PSEN1-223ENST00000557511 TRIP11Q15643 1979 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 PDCD11Q14690 1871 aaKnown RBP8.88□□□□□ -0.99
PSEN1-223ENST00000557511 GABRDO14764 452 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 PAPLNO95428 1278 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 TPM2P07951 284 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 CSH1P0DML2 217 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 CSH2P0DML3 217 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 RFX1P22670 979 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 CDC25CP30307 473 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 GRIK1P39086 918 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 RPIAP49247 311 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 NLRP12P59046 1061 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 NOP14P78316 857 aaKnown RBP8.88□□□□□ -0.99
PSEN1-223ENST00000557511 NTHL1P78549 312 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 PTPN21Q16825 1174 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 CT47A1Q5JQC4 288 aaPredicted RBP8.88□□□□□ -0.99
PSEN1-223ENST00000557511 UBALD2Q8IYN6 164 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 FAXDC2Q96IV6 333 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 MRPL45Q9BRJ2 306 aaKnown RBP8.88□□□□□ -0.99
PSEN1-223ENST00000557511 MED10Q9BTT4 135 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 SRRTQ9BXP5 876 aaKnown RBP8.88□□□□□ -0.99
PSEN1-223ENST00000557511 NIF3L1Q9GZT8 377 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 CYP3A43Q9HB55 503 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 AVENQ9NQS1 362 aaPredicted RBP8.88□□□□□ -0.99
PSEN1-223ENST00000557511 HCFC1R1Q9NWW0 138 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 RAB20Q9NX57 234 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 GDE1Q9NZC3 331 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 EPS15L1Q9UBC2 864 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 UXTQ9UBK9 157 aaPredicted RBP8.88□□□□□ -0.99
PSEN1-223ENST00000557511 MUTYHQ9UIF7 546 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 SORCS3Q9UPU3 1222 aa8.88□□□□□ -0.99
PSEN1-223ENST00000557511 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.88□□□□□ -0.99
PSEN1-223ENST00000557511 PI4K2BG5E9Z4 385 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 P4HA2O15460 535 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 MICAL2O94851 1124 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 VNN1O95497 513 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 ASS1P00966 412 aaKnown RBP8.87□□□□□ -0.99
PSEN1-223ENST00000557511 LAMP2P13473 410 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 PTPN1P18031 435 aaKnown RBP8.87□□□□□ -0.99
PSEN1-223ENST00000557511 MAGEA11P43364 429 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 MTIF2P46199 727 aaKnown RBP8.87□□□□□ -0.99
PSEN1-223ENST00000557511 PMS1P54277 932 aaKnown RBP8.87□□□□□ -0.99
PSEN1-223ENST00000557511 PSMC1P62191 440 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms