RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 GGT6Q6P531 493 aa5.54□□□□□ -1.52
PRPF39-212ENST00000557477 TMPRSS9Q7Z410 1059 aa5.54□□□□□ -1.52
PRPF39-212ENST00000557477 KCTD20Q7Z5Y7 419 aa5.54□□□□□ -1.52
PRPF39-212ENST00000557477 GAS2L3Q86XJ1 694 aa5.54□□□□□ -1.52
PRPF39-212ENST00000557477 YAF2Q8IY57 180 aa5.54□□□□□ -1.52
PRPF39-212ENST00000557477 SDR16C5Q8N3Y7 309 aa5.54□□□□□ -1.52
PRPF39-212ENST00000557477 VGLL2Q8N8G2 317 aa5.54□□□□□ -1.52
PRPF39-212ENST00000557477 MED15Q96RN5 788 aa5.54□□□□□ -1.52
PRPF39-212ENST00000557477 PPP1R9BQ96SB3 815 aa5.54□□□□□ -1.52
PRPF39-212ENST00000557477 HEPHQ9BQS7 1158 aa5.54□□□□□ -1.52
PRPF39-212ENST00000557477 STK33Q9BYT3 514 aa5.54□□□□□ -1.52
PRPF39-212ENST00000557477 RGS17Q9UGC6 210 aaPredicted RBP5.54□□□□□ -1.52
PRPF39-212ENST00000557477 MAGED2Q9UNF1 606 aaPredicted RBP5.54□□□□□ -1.52
PRPF39-212ENST00000557477 MAP3K2Q9Y2U5 619 aa5.54□□□□□ -1.52
PRPF39-212ENST00000557477 TCAF1Q9Y4C2 921 aa5.54□□□□□ -1.52
PRPF39-212ENST00000557477 KDM6BO15054 1643 aa5.54□□□□□ -1.52
PRPF39-212ENST00000557477 LOC102723971A0A1B0GUV8 181 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 MARCH11A6NNE9 402 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 AREL1O15033 823 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 CREB3O43889 395 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 FAM20BO75063 409 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 NCR1O76036 304 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 CFIP05156 583 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 CYP2C9P11712 490 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 MYL4P12829 197 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 XRCC6P12956 609 aaKnown RBP eCLIP5.53□□□□□ -1.52
PRPF39-212ENST00000557477 BTF3P20290 206 aaKnown RBP5.53□□□□□ -1.52
PRPF39-212ENST00000557477 CHKAP35790 457 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 HALP42357 657 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 ALDH9A1P49189 494 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 SLC29A2Q14542 456 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 R3HDM1Q15032 1099 aaKnown RBP5.53□□□□□ -1.52
PRPF39-212ENST00000557477 PUM3Q15397 648 aaKnown RBP5.53□□□□□ -1.52
PRPF39-212ENST00000557477 ELF2Q15723 593 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 RABL3Q5HYI8 236 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 FCRL6Q6DN72 434 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 FOXR2Q6PJQ5 311 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 TMEM108Q6UXF1 575 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 ZNF527Q8NB42 609 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 IPCEF1Q8WWN9 437 aaPredicted RBP5.53□□□□□ -1.52
PRPF39-212ENST00000557477 MOGAT1Q96PD6 335 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 RNF181Q9P0P0 153 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 RAPGEFL1Q9UHV5 662 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 KCNE5Q9UJ90 142 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 SLC39A10Q9ULF5 831 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 MTO1Q9Y2Z2 717 aaKnown RBP5.53□□□□□ -1.52
PRPF39-212ENST00000557477 MORC2Q9Y6X9 1032 aaPredicted RBP5.53□□□□□ -1.52
PRPF39-212ENST00000557477 FPGT-TNNI3KV9GXZ4 949 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 ABCA10Q8WWZ4 1543 aa5.53□□□□□ -1.52
PRPF39-212ENST00000557477 WRNQ14191 1432 aaPredicted RBP eCLIP5.52□□□□□ -1.53
PRPF39-212ENST00000557477 PRG4Q92954 1404 aaPredicted RBP5.52□□□□□ -1.53
PRPF39-212ENST00000557477 hCG_1984214I3L0E3 225 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 K7ESM1 405 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 PODXLO00592 558 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 FFAR2O15552 330 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 RECQL4O94761 1208 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 ZFP36P26651 326 aaKnown RBP5.52□□□□□ -1.53
PRPF39-212ENST00000557477 GABRB3P28472 473 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 PDIA3P30101 505 aaKnown RBP5.52□□□□□ -1.53
PRPF39-212ENST00000557477 PTDSS1P48651 473 aaKnown RBP5.52□□□□□ -1.53
PRPF39-212ENST00000557477 PXNP49023 591 aaPredicted RBP5.52□□□□□ -1.53
PRPF39-212ENST00000557477 CPT1AP50416 773 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 ANXA11P50995 505 aaKnown RBP5.52□□□□□ -1.53
PRPF39-212ENST00000557477 ITGA8P53708 1063 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 LOXL3P58215 753 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 CXADRP78310 365 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 KRT17Q04695 432 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 ICA1Q05084 483 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 GALNT1Q10472 559 aaPredicted RBP5.52□□□□□ -1.53
PRPF39-212ENST00000557477 ARHGEF7Q14155 803 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 ZRSR2Q15696 482 aaKnown RBP5.52□□□□□ -1.53
PRPF39-212ENST00000557477 NPY5RQ15761 445 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 GEN1Q17RS7 908 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 CD300EQ496F6 205 aaPredicted RBP5.52□□□□□ -1.53
PRPF39-212ENST00000557477 LAYNQ6UX15 382 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 CLNKQ7Z7G1 428 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 PALM2Q8IXS6 379 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 ADGRG5Q8IZF4 528 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 TMEM132CQ8N3T6 1108 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 ANKRD42Q8N9B4 389 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 GLIS1Q8NBF1 620 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 CXorf38Q8TB03 319 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 IPO4Q8TEX9 1081 aaKnown RBP5.52□□□□□ -1.53
PRPF39-212ENST00000557477 MUL1Q969V5 352 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 TMEM125Q96AQ2 219 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 NACC2Q96BF6 587 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 RNF31Q96EP0 1072 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 C8orf49Q96NF6 230 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 MAGEB5Q9BZ81 275 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 XPNPEP3Q9NQH7 507 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 SHOC2Q9UQ13 582 aa5.52□□□□□ -1.53
PRPF39-212ENST00000557477 MRPS17Q9Y2R5 130 aaKnown RBP5.52□□□□□ -1.53
PRPF39-212ENST00000557477 PRAMEF33A0A0G2JMD5 474 aa5.51□□□□□ -1.53
PRPF39-212ENST00000557477 A0A1W2PS29 197 aa5.51□□□□□ -1.53
PRPF39-212ENST00000557477 E7ENX8 843 aa5.51□□□□□ -1.53
PRPF39-212ENST00000557477 CCP110O43303 1012 aa5.51□□□□□ -1.53
PRPF39-212ENST00000557477 RRP9O43818 475 aaKnown RBP5.51□□□□□ -1.53
PRPF39-212ENST00000557477 PRAMEF10O60809 474 aa5.51□□□□□ -1.53
PRPF39-212ENST00000557477 TYRP1P17643 537 aa5.51□□□□□ -1.53
PRPF39-212ENST00000557477 ITGALP20701 1170 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms