RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 PMM2O15305 246 aa13.31□□□□□ -0.28
SLIRP-209ENST00000557342 GPR37L1O60883 481 aa13.31□□□□□ -0.28
SLIRP-209ENST00000557342 CEBPBP17676 345 aa13.31□□□□□ -0.28
SLIRP-209ENST00000557342 CYP2F1P24903 491 aa13.31□□□□□ -0.28
SLIRP-209ENST00000557342 ASPAP45381 313 aa13.31□□□□□ -0.28
SLIRP-209ENST00000557342 RAP1GAPP47736 663 aa13.31□□□□□ -0.28
SLIRP-209ENST00000557342 CDR1P51861 262 aa13.31□□□□□ -0.28
SLIRP-209ENST00000557342 MARSP56192 900 aaKnown RBP13.31□□□□□ -0.28
SLIRP-209ENST00000557342 SIGLEC14Q08ET2 396 aa13.31□□□□□ -0.28
SLIRP-209ENST00000557342 TPD52L1Q16890 204 aaPredicted RBP13.31□□□□□ -0.28
SLIRP-209ENST00000557342 MDH1BQ5I0G3 518 aa13.31□□□□□ -0.28
SLIRP-209ENST00000557342 CT47A1Q5JQC4 288 aaPredicted RBP13.31□□□□□ -0.28
SLIRP-209ENST00000557342 TMC8Q8IU68 726 aa13.31□□□□□ -0.28
SLIRP-209ENST00000557342 GIPC2Q8TF65 315 aa13.31□□□□□ -0.28
SLIRP-209ENST00000557342 MCRS1Q96EZ8 462 aa13.31□□□□□ -0.28
SLIRP-209ENST00000557342 LPIN3Q9BQK8 851 aa13.31□□□□□ -0.28
SLIRP-209ENST00000557342 ELOVL4Q9GZR5 314 aa13.31□□□□□ -0.28
SLIRP-209ENST00000557342 SDCBP2Q9H190 292 aa13.31□□□□□ -0.28
SLIRP-209ENST00000557342 FAM124BQ9H5Z6 455 aaPredicted RBP13.31□□□□□ -0.28
SLIRP-209ENST00000557342 APOBEC3GQ9HC16 384 aaKnown RBP13.31□□□□□ -0.28
SLIRP-209ENST00000557342 UXTQ9UBK9 157 aaPredicted RBP13.31□□□□□ -0.28
SLIRP-209ENST00000557342 NME7Q9Y5B8 376 aa13.31□□□□□ -0.28
SLIRP-209ENST00000557342 TRIM66O15016 1216 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 P4HA2O15460 535 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 BDNFP23560 247 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 ANXA13P27216 316 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 GABRR2P28476 465 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 CDC25CP30307 473 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 GRIK1P39086 918 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 CCR2P41597 374 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 FMO5P49326 533 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 NDST1P52848 882 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 INCA1Q0VD86 236 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 HTR4Q13639 388 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 CBWD6Q4V339 395 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 ARHGAP15Q53QZ3 475 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 CBWD3Q5JTY5 395 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 TMEM31Q5JXX7 168 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 CBWD5Q5RIA9 395 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 SCN4BQ8IWT1 228 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 SEMA4DQ92854 862 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 ELMO3Q96BJ8 720 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 TCEAL4Q96EI5 215 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 SPATA17Q96L03 361 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 ATXN3LQ9H3M9 355 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 DPEP3Q9H4B8 488 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.3□□□□□ -0.286e-11■■■■■ 34.8
SLIRP-209ENST00000557342 EHD2Q9NZN4 543 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 ZMYM5Q9UJ78 669 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 DUSP12Q9UNI6 340 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 ANAPC1Q9H1A4 1944 aa13.3□□□□□ -0.28
SLIRP-209ENST00000557342 A0A1W2PRU2 124 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 MOSPD3O75425 235 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 NOL4O94818 638 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 ERCC5P28715 1186 aaPredicted RBP13.29□□□□□ -0.28
SLIRP-209ENST00000557342 GPR15P49685 360 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 TEAD2Q15562 447 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 DDR2Q16832 855 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 CCDC142Q17RM4 750 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 DPCR1Q3MIW9 517 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 RBM43Q6ZSC3 357 aaKnown RBP13.29□□□□□ -0.28
SLIRP-209ENST00000557342 TRIM67Q6ZTA4 783 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 FAM114A1Q8IWE2 563 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 TRIM59Q8IWR1 403 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 CRYBG2Q8N1P7 616 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 SLC44A3Q8N4M1 653 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 SHKBP1Q8TBC3 707 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 TRMT2BQ96GJ1 504 aaKnown RBP13.29□□□□□ -0.28
SLIRP-209ENST00000557342 C8orf48Q96LL4 319 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 MYRFLQ96LU7 910 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 NT5C1AQ9BXI3 368 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 ZNF334Q9HCZ1 680 aaPredicted RBP13.29□□□□□ -0.28
SLIRP-209ENST00000557342 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.29□□□□□ -0.28
SLIRP-209ENST00000557342 NUMBLQ9Y6R0 609 aa13.29□□□□□ -0.28
SLIRP-209ENST00000557342 PATJQ8NI35 1801 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 SLC38A8A6NNN8 435 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 SOBPA7XYQ1 873 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 PRR33A8MZF0 331 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 CILPO75339 1184 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 ECI2O75521 394 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 AFPP02771 609 aaKnown RBP13.28□□□□□ -0.28
SLIRP-209ENST00000557342 SRFP11831 508 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 HMGA1P17096 107 aaKnown RBP13.28□□□□□ -0.28
SLIRP-209ENST00000557342 GJA1P17302 382 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 TBXAS1P24557 533 aaPredicted RBP13.28□□□□□ -0.28
SLIRP-209ENST00000557342 DDX6P26196 483 aaKnown RBP eCLIP13.28□□□□□ -0.28
SLIRP-209ENST00000557342 YWHAEP62258 255 aaKnown RBP13.28□□□□□ -0.28
SLIRP-209ENST00000557342 KCNH2Q12809 1159 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 SASS6Q6UVJ0 657 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 PARM1Q6UWI2 310 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 GAREM2Q75VX8 874 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 ACOT1Q86TX2 421 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 GPR152Q8TDT2 470 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 RSAD2Q8WXG1 361 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 FGF14Q92915 247 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 SMARCD2Q92925 531 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 E2F7Q96AV8 911 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 ELSPBP1Q96BH3 223 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 CNOT6LQ96LI5 555 aaKnown RBP13.28□□□□□ -0.28
SLIRP-209ENST00000557342 ASB16Q96NS5 453 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms