RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 BRCA1P38398 1863 aaKnown RBP4.8□□□□□ -1.64
CHD8-212ENST00000557329 A0A1B0GTW7 788 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 CCDC154A6NI56 674 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 ERN1O75460 977 aaKnown RBP4.8□□□□□ -1.64
CHD8-212ENST00000557329 NCR1O76036 304 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 CDKL5O76039 1030 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 GPANK1O95872 356 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 GNAI3P08754 354 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 CT47B1P0C2W7 299 aaPredicted RBP4.8□□□□□ -1.64
CHD8-212ENST00000557329 HKR1P10072 659 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 PHKG2P15735 406 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 TGM1P22735 817 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 SMARCA1P28370 1054 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 PCSK1P29120 753 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 TNNT2P45379 298 aaPredicted RBP4.8□□□□□ -1.64
CHD8-212ENST00000557329 MTHFSP49914 203 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 EPHB1P54762 984 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 GNAI1P63096 354 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 PIGFQ07326 219 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 ERCC6LQ2NKX8 1250 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 PDCD4Q53EL6 469 aaKnown RBP4.8□□□□□ -1.64
CHD8-212ENST00000557329 CST9Q5W186 159 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 TSHZ3Q63HK5 1081 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 PDSS2Q86YH6 399 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 SYT12Q8IV01 421 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 CMTR2Q8IYT2 770 aaKnown RBP4.8□□□□□ -1.64
CHD8-212ENST00000557329 TMEM132CQ8N3T6 1108 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 LCORLQ8N3X6 602 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 CPEB3Q8NE35 698 aaKnown RBP4.8□□□□□ -1.64
CHD8-212ENST00000557329 OR2I1PQ8NGU4 316 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 IFI44Q8TCB0 444 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 NSUN6Q8TEA1 469 aaKnown RBP4.8□□□□□ -1.64
CHD8-212ENST00000557329 STON2Q8WXE9 905 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 LARP4BQ92615 738 aaKnown RBP4.8□□□□□ -1.64
CHD8-212ENST00000557329 DPF2Q92785 391 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 HSPBAP1Q96EW2 488 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 CLPTM1LQ96KA5 538 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 MRGPRX4Q96LA9 322 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 TOR3AQ9H497 397 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 WDCPQ9H6R7 721 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 DDX56Q9NY93 547 aaKnown RBP4.8□□□□□ -1.64
CHD8-212ENST00000557329 DKK2Q9UBU2 259 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 PACSIN3Q9UKS6 424 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 PNMA8BQ9ULN7 279 aaPredicted RBP4.8□□□□□ -1.64
CHD8-212ENST00000557329 DMTF1Q9Y222 760 aa4.8□□□□□ -1.64
CHD8-212ENST00000557329 LUC7L2Q9Y383 392 aaKnown RBP4.8□□□□□ -1.64
CHD8-212ENST00000557329 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.8□□□□□ -1.64
CHD8-212ENST00000557329 TNRC18O15417 2968 aaPredicted RBP4.8□□□□□ -1.64
CHD8-212ENST00000557329 ROCK2O75116 1388 aaKnown RBP4.79□□□□□ -1.64
CHD8-212ENST00000557329 A0A087X1B8 175 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 PIPSLA2A3N6 862 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 MARCH11A6NNE9 402 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 KIAA0391O15091 583 aaKnown RBP4.79□□□□□ -1.64
CHD8-212ENST00000557329 SOAT2O75908 522 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 NDUFA10O95299 355 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 IL33O95760 270 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 CHEK2O96017 543 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 PDGFRBP09619 1106 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 EPS15P42566 896 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 FXR1P51114 621 aaKnown RBP eCLIP4.79□□□□□ -1.64
CHD8-212ENST00000557329 ZNF844Q08AG5 666 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 C1orf141Q5JVX7 400 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 METRNLQ641Q3 311 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 LAIR1Q6GTX8 287 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 USP45Q70EL2 814 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 PHACTR3Q96KR7 559 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 SMAD5Q99717 465 aaKnown RBP4.79□□□□□ -1.64
CHD8-212ENST00000557329 LDAHQ9H6V9 325 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 TBCCD1Q9NVR7 557 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 CFAP97Q9P2B7 532 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 SLC23A1Q9UHI7 598 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 LIMCH1Q9UPQ0 1083 aa4.79□□□□□ -1.64
CHD8-212ENST00000557329 MTO1Q9Y2Z2 717 aaKnown RBP4.79□□□□□ -1.64
CHD8-212ENST00000557329 KDM6AO15550 1401 aaPredicted RBP4.79□□□□□ -1.64
CHD8-212ENST00000557329 FAM208AQ9UK61 1670 aaKnown RBP4.78□□□□□ -1.64
CHD8-212ENST00000557329 ERVV-2B6SEH9 535 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 E7ENX8 843 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 SLC43A1O75387 559 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 ALDH1L1O75891 902 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 HSP90AB1P08238 724 aaKnown RBP4.78□□□□□ -1.64
CHD8-212ENST00000557329 PDCP20941 246 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 FPR1P21462 350 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 HUNKP57058 714 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 TAP2Q03519 686 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 TLE1Q04724 770 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 RESTQ13127 1097 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 CSRP2Q16527 193 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 CCDC93Q567U6 631 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 OLFM4Q6UX06 510 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 CTU1Q7Z7A3 348 aaKnown RBP4.78□□□□□ -1.64
CHD8-212ENST00000557329 DNAJC10Q8IXB1 793 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 RPUSD2Q8IZ73 545 aaKnown RBP4.78□□□□□ -1.64
CHD8-212ENST00000557329 GPC2Q8N158 579 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 PRR18Q8N4B5 295 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 MASTLQ96GX5 879 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 GPATCH3Q96I76 525 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 BRIP1Q9BX63 1249 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 GLIS2Q9BZE0 524 aaPredicted RBP4.78□□□□□ -1.64
CHD8-212ENST00000557329 SERHL2Q9H4I8 314 aa4.78□□□□□ -1.64
CHD8-212ENST00000557329 GSTO2Q9H4Y5 243 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms