RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 RAB20Q9NX57 234 aa24.03■■□□□ 1.44
PABPN1-206ENST00000556809 MAGEC2Q9UBF1 373 aaPredicted RBP24.03■■□□□ 1.44
PABPN1-206ENST00000556809 COQ4Q9Y3A0 265 aa24.03■■□□□ 1.44
PABPN1-206ENST00000556809 ASB3Q9Y575 518 aa24.03■■□□□ 1.44
PABPN1-206ENST00000556809 NME7Q9Y5B8 376 aa24.03■■□□□ 1.44
PABPN1-206ENST00000556809 PCDHB5Q9Y5E4 795 aa24.03■■□□□ 1.44
PABPN1-206ENST00000556809 NARSO43776 548 aaKnown RBP24.02■■□□□ 1.44
PABPN1-206ENST00000556809 AFPP02771 609 aaKnown RBP24.02■■□□□ 1.44
PABPN1-206ENST00000556809 P4HA1P13674 534 aa24.02■■□□□ 1.44
PABPN1-206ENST00000556809 COL9A1P20849 921 aa24.02■■□□□ 1.44
PABPN1-206ENST00000556809 PCSK1P29120 753 aa24.02■■□□□ 1.44
PABPN1-206ENST00000556809 MTIF2P46199 727 aaKnown RBP24.02■■□□□ 1.44
PABPN1-206ENST00000556809 NOP14P78316 857 aaKnown RBP24.02■■□□□ 1.44
PABPN1-206ENST00000556809 MYL5Q02045 173 aa24.02■■□□□ 1.44
PABPN1-206ENST00000556809 KCNH2Q12809 1159 aa24.02■■□□□ 1.44
PABPN1-206ENST00000556809 CCDC142Q17RM4 750 aa24.02■■□□□ 1.44
PABPN1-206ENST00000556809 HSP90AA4PQ58FG1 418 aa24.02■■□□□ 1.44
PABPN1-206ENST00000556809 SPOPLQ6IQ16 392 aa24.02■■□□□ 1.44
PABPN1-206ENST00000556809 DNAJB7Q7Z6W7 309 aaPredicted RBP24.02■■□□□ 1.44
PABPN1-206ENST00000556809 MCRS1Q96EZ8 462 aa24.02■■□□□ 1.44
PABPN1-206ENST00000556809 SEPT5Q99719 369 aaPredicted RBP24.02■■□□□ 1.44
PABPN1-206ENST00000556809 MRPL45Q9BRJ2 306 aaKnown RBP24.02■■□□□ 1.44
PABPN1-206ENST00000556809 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.02■■□□□ 1.44
PABPN1-206ENST00000556809 ABI2Q9NYB9 513 aaPredicted RBP24.02■■□□□ 1.44
PABPN1-206ENST00000556809 GTF3C4Q9UKN8 822 aa24.02■■□□□ 1.44
PABPN1-206ENST00000556809 MYBPHLA2RUH7 354 aa24.01■■□□□ 1.43
PABPN1-206ENST00000556809 PMM2O15305 246 aa24.01■■□□□ 1.43
PABPN1-206ENST00000556809 LRRN2O75325 713 aa24.01■■□□□ 1.43
PABPN1-206ENST00000556809 MGAT5BQ3V5L5 792 aa24.01■■□□□ 1.43
PABPN1-206ENST00000556809 MTSS1LQ765P7 747 aa24.01■■□□□ 1.43
PABPN1-206ENST00000556809 PBXIP1Q96AQ6 731 aa24.01■■□□□ 1.43
PABPN1-206ENST00000556809 ZNF334Q9HCZ1 680 aaPredicted RBP24.01■■□□□ 1.43
PABPN1-206ENST00000556809 ABCB6Q9NP58 842 aa24.01■■□□□ 1.43
PABPN1-206ENST00000556809 CDH9Q9ULB4 789 aa24.01■■□□□ 1.43
PABPN1-206ENST00000556809 PTPRDP23468 1912 aa24.01■■□□□ 1.43
PABPN1-206ENST00000556809 KCNJ18B7U540 433 aa24■■□□□ 1.43
PABPN1-206ENST00000556809 P4HA2O15460 535 aa24■■□□□ 1.43
PABPN1-206ENST00000556809 ATP2C2O75185 946 aa24■■□□□ 1.43
PABPN1-206ENST00000556809 MYL4P12829 197 aa24■■□□□ 1.43
PABPN1-206ENST00000556809 KCNJ12Q14500 433 aa24■■□□□ 1.43
PABPN1-206ENST00000556809 SCARA5Q6ZMJ2 495 aa24■■□□□ 1.43
PABPN1-206ENST00000556809 SHKBP1Q8TBC3 707 aa24■■□□□ 1.43
PABPN1-206ENST00000556809 LPIN3Q9BQK8 851 aa24■■□□□ 1.43
PABPN1-206ENST00000556809 BPIFA3Q9BQP9 254 aa24■■□□□ 1.43
PABPN1-206ENST00000556809 SYT15Q9BQS2 421 aa24■■□□□ 1.43
PABPN1-206ENST00000556809 SMYD3Q9H7B4 428 aa24■■□□□ 1.43
PABPN1-206ENST00000556809 APOBEC3GQ9HC16 384 aaKnown RBP24■■□□□ 1.43
PABPN1-206ENST00000556809 CRTAC1Q9NQ79 661 aa24■■□□□ 1.43
PABPN1-206ENST00000556809 ZNF318Q5VUA4 2279 aa23.99■■□□□ 1.43
PABPN1-206ENST00000556809 PDGFBP01127 241 aaPredicted RBP23.99■■□□□ 1.43
PABPN1-206ENST00000556809 GJA1P17302 382 aa23.99■■□□□ 1.43
PABPN1-206ENST00000556809 EEF1GP26641 437 aaKnown RBP23.99■■□□□ 1.43
PABPN1-206ENST00000556809 ASPAP45381 313 aa23.99■■□□□ 1.43
PABPN1-206ENST00000556809 CETN1Q12798 172 aa23.99■■□□□ 1.43
PABPN1-206ENST00000556809 CFAP221Q4G0U5 840 aa23.99■■□□□ 1.43
PABPN1-206ENST00000556809 WDR44Q5JSH3 913 aa23.99■■□□□ 1.43
PABPN1-206ENST00000556809 CDKAL1Q5VV42 579 aa23.99■■□□□ 1.43
PABPN1-206ENST00000556809 GAREM2Q75VX8 874 aa23.99■■□□□ 1.43
PABPN1-206ENST00000556809 ITIH5Q86UX2 942 aa23.99■■□□□ 1.43
PABPN1-206ENST00000556809 ZSWIM3Q96MP5 696 aa23.99■■□□□ 1.43
PABPN1-206ENST00000556809 NIF3L1Q9GZT8 377 aa23.99■■□□□ 1.43
PABPN1-206ENST00000556809 SNX25Q9H3E2 840 aa23.99■■□□□ 1.43
PABPN1-206ENST00000556809 FANCLQ9NW38 375 aa23.99■■□□□ 1.43
PABPN1-206ENST00000556809 RAPGEFL1Q9UHV5 662 aa23.99■■□□□ 1.43
PABPN1-206ENST00000556809 KMT2EQ8IZD2 1858 aa23.98■■□□□ 1.43
PABPN1-206ENST00000556809 DENND4CQ5VZ89 1909 aa23.98■■□□□ 1.43
PABPN1-206ENST00000556809 SRFP11831 508 aa23.98■■□□□ 1.43
PABPN1-206ENST00000556809 FCARP24071 287 aa23.98■■□□□ 1.43
PABPN1-206ENST00000556809 CYP2F1P24903 491 aa23.98■■□□□ 1.43
PABPN1-206ENST00000556809 GNL1P36915 607 aaPredicted RBP23.98■■□□□ 1.43
PABPN1-206ENST00000556809 RAP1GAPP47736 663 aa23.98■■□□□ 1.43
PABPN1-206ENST00000556809 PSMC1P62191 440 aaKnown RBP23.98■■□□□ 1.43
PABPN1-206ENST00000556809 NCAPHQ15003 741 aa23.98■■□□□ 1.43
PABPN1-206ENST00000556809 TEAD2Q15562 447 aa23.98■■□□□ 1.43
PABPN1-206ENST00000556809 MAN2A1Q16706 1144 aa23.98■■□□□ 1.43
PABPN1-206ENST00000556809 TCP11X2Q5H9J9 407 aa23.98■■□□□ 1.43
PABPN1-206ENST00000556809 FBXL6Q8N531 539 aa23.98■■□□□ 1.43
PABPN1-206ENST00000556809 AOPEPQ8N6M6 819 aa23.98■■□□□ 1.43
PABPN1-206ENST00000556809 FUBP3Q96I24 572 aaKnown RBP eCLIP23.98■■□□□ 1.43
PABPN1-206ENST00000556809 SDCBP2Q9H190 292 aa23.98■■□□□ 1.43
PABPN1-206ENST00000556809 IL21Q9HBE4 155 aa23.98■■□□□ 1.43
PABPN1-206ENST00000556809 ECI2O75521 394 aa23.97■■□□□ 1.43
PABPN1-206ENST00000556809 PDGFRBP09619 1106 aa23.97■■□□□ 1.43
PABPN1-206ENST00000556809 HMGA1P17096 107 aaKnown RBP23.97■■□□□ 1.43
PABPN1-206ENST00000556809 GPR15P49685 360 aa23.97■■□□□ 1.43
PABPN1-206ENST00000556809 ZNF165P49910 485 aa23.97■■□□□ 1.43
PABPN1-206ENST00000556809 CDH8P55286 799 aa23.97■■□□□ 1.43
PABPN1-206ENST00000556809 FAM78AQ5JUQ0 283 aa23.97■■□□□ 1.43
PABPN1-206ENST00000556809 OR6B3Q8NGW1 331 aa23.97■■□□□ 1.43
PABPN1-206ENST00000556809 GIPC2Q8TF65 315 aa23.97■■□□□ 1.43
PABPN1-206ENST00000556809 FAXDC2Q96IV6 333 aa23.97■■□□□ 1.43
PABPN1-206ENST00000556809 ASB16Q96NS5 453 aa23.97■■□□□ 1.43
PABPN1-206ENST00000556809 TUBGCP2Q9BSJ2 902 aa23.97■■□□□ 1.43
PABPN1-206ENST00000556809 BCO2Q9BYV7 579 aa23.97■■□□□ 1.43
PABPN1-206ENST00000556809 SLC2A4RGQ9NR83 387 aa23.97■■□□□ 1.43
PABPN1-206ENST00000556809 WNT16Q9UBV4 365 aa23.97■■□□□ 1.43
PABPN1-206ENST00000556809 GREB1Q4ZG55 1949 aa23.96■■□□□ 1.43
PABPN1-206ENST00000556809 OBSL1O75147 1896 aa23.96■■□□□ 1.43
PABPN1-206ENST00000556809 A0A1W2PRU2 124 aa23.96■■□□□ 1.43
PABPN1-206ENST00000556809 PRKCSHP14314 528 aaPredicted RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms