RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 MLF2Q15773 248 aaPredicted RBP7.86□□□□□ -1.15
SCFD1-222ENST00000556768 OCLNQ16625 522 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 FAM78AQ5JUQ0 283 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 PRSS36Q5K4E3 855 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 TANGO2Q6ICL3 276 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 EPM2AIP1Q7L775 607 aaPredicted RBP7.86□□□□□ -1.15
SCFD1-222ENST00000556768 CBWD2Q8IUF1 395 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 PDCL2Q8N4E4 241 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 TOP6BLQ8N6T0 577 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 OR10T2Q8NGX3 314 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 ZSCAN18Q8TBC5 510 aaPredicted RBP7.86□□□□□ -1.15
SCFD1-222ENST00000556768 DEPDC1BQ8WUY9 529 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 LEO1Q8WVC0 666 aaPredicted RBP7.86□□□□□ -1.15
SCFD1-222ENST00000556768 SCFD1Q8WVM8 642 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 CCDC127Q96BQ5 260 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 TCEAL4Q96EI5 215 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 PAGE5Q96GU1 130 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 ASB16Q96NS5 453 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 PRR14Q9BWN1 585 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 FGFBP2Q9BYJ0 223 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 SERTAD1Q9UHV2 236 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 TDRD15B5MCY1 1934 aaKnown RBP7.86□□□□□ -1.15
SCFD1-222ENST00000556768 CACNA1HO95180 2353 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 CFAP54Q96N23 3096 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 BHMG1C9JSJ3 638 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-222ENST00000556768 ZNF263O14978 683 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 CLIC2O15247 247 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 PI15O43692 258 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 PFKFB1P16118 471 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 NPR3P17342 541 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 TRIM21P19474 475 aaKnown RBP7.85□□□□□ -1.15
SCFD1-222ENST00000556768 GABRR2P28476 465 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 AP3M2P53677 418 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 UBXN2BQ14CS0 331 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 TEAD2Q15562 447 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 C1orf228Q6PIY5 440 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 C4orf50Q6ZRC1 276 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 SPATA2LQ8IUW3 424 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-222ENST00000556768 MFSD6LQ8IWD5 586 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 SCUBE3Q8IX30 993 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 CCDC105Q8IYK2 499 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 ADGRF2Q8IZF7 708 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 TMEM130Q8N3G9 435 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 DTWD2Q8NBA8 298 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 GLIS3Q8NEA6 775 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 ARMC2Q8NEN0 867 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 CSGALNACT1Q8TDX6 532 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 DNASE1L2Q92874 299 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 BORCS6Q96GS4 357 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 TRPV4Q9HBA0 871 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 ABCB6Q9NP58 842 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 THG1LQ9NWX6 298 aaKnown RBP7.85□□□□□ -1.15
SCFD1-222ENST00000556768 EHD2Q9NZN4 543 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 UXTQ9UBK9 157 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-222ENST00000556768 FRMD4BQ9Y2L6 1034 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 FAM170BA6NMN3 283 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 TGFB1I1O43294 461 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 PRMT3O60678 531 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 DCNP07585 359 aaKnown RBP7.85□□□□□ -1.15
SCFD1-222ENST00000556768 CSH1P0DML2 217 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 CSH2P0DML3 217 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 P4HA1P13674 534 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 GJA1P17302 382 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 CASP1P29466 404 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 GDI1P31150 447 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 GNL1P36915 607 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-222ENST00000556768 AVPR1AP37288 418 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 CCR2P41597 374 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 MAGEA9P43362 315 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 TNNC1P63316 161 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 NUCB2P80303 420 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 BIRC3Q13489 604 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 PSMD6Q15008 389 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 ANGPT1Q15389 498 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 BMT2Q1RMZ1 405 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 WDR72Q3MJ13 1102 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 LMBRD2Q68DH5 695 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-222ENST00000556768 CWF19L1Q69YN2 538 aaKnown RBP7.85□□□□□ -1.15
SCFD1-222ENST00000556768 ZC3H14Q6PJT7 736 aaKnown RBP7.85□□□□□ -1.15
SCFD1-222ENST00000556768 TRAPPC11Q7Z392 1133 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 ARID3BQ8IVW6 561 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-222ENST00000556768 C1orf210Q8IVY1 113 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 FSIP1Q8NA03 581 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 ZSWIM2Q8NEG5 633 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 PJA1Q8NG27 643 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 MRPS31Q92665 395 aaKnown RBP7.85□□□□□ -1.15
SCFD1-222ENST00000556768 FUBP3Q96I24 572 aaKnown RBP eCLIP7.85□□□□□ -1.15
SCFD1-222ENST00000556768 TMEM209Q96SK2 561 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 PI4K2AQ9BTU6 479 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 OSBPL6Q9BZF3 934 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 SNX25Q9H3E2 840 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 EVA1BQ9NVM1 165 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 HOOK1Q9UJC3 728 aaKnown RBP7.85□□□□□ -1.15
SCFD1-222ENST00000556768 GTF3C4Q9UKN8 822 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 L1RE1Q9UN81 338 aa7.85□□□□□ -1.15
SCFD1-222ENST00000556768 A0A1W2PQ27 194 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 A0A1W2PQ64 194 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 A0A1W2PQD8 194 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 PDXKO00764 312 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 CALUO43852 315 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms