RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 EXT2Q93063 718 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 TLCD1Q96CP7 247 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 DISP2A7MBM2 1401 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 TMEM150BA6NC51 233 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 ATP9BO43861 1147 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 CYP3A4P08684 503 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 GPD1P21695 349 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 FAM71AQ8IYT1 594 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 SCG3Q8WXD2 468 aaKnown RBP15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 TBC1D10AQ9BXI6 508 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 SAR1AQ9NR31 198 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 TAGLN3Q9UI15 199 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 FCHO1O14526 889 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 RASSF9O75901 435 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 CALCAP01258 141 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 ATXN3P54252 364 aaPredicted RBP15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 POU5F1BQ06416 359 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 SLC26A11Q86WA9 606 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 VPS39Q96JC1 886 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 TRIM15Q9C019 465 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 AGO4Q9HCK5 861 aaKnown RBP15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 AGAP1Q9UPQ3 857 aa15.68■□□□□ 0.1
ARHGEF40-207ENST00000556399 KIF1AQ12756 1690 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 DNAJC6O75061 913 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 APOEP02649 317 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 VIL1P09327 827 aaKnown RBP15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 EFTUD2Q15029 972 aaKnown RBP eCLIP15.67■□□□□ 0.11e-6■■■□□ 16.6
ARHGEF40-207ENST00000556399 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 CCDC138Q96M89 665 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 CAMTA1Q9Y6Y1 1673 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 MAP3K6O95382 1288 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 KCNV1Q6PIU1 500 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 UBA3Q8TBC4 463 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 SLC12A6Q9UHW9 1150 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 NR2E1Q9Y466 385 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 NUB1Q9Y5A7 615 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 GAKO14976 1311 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 RNF103-CHMP3A0A140T963 221 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 MAFGO15525 162 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 SNUPNO95149 360 aaKnown RBP15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 GJB6O95452 261 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 FMO1Q01740 532 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 RWDD4Q6NW29 188 aaKnown RBP15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 LRRC74BQ6ZQY2 392 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 AGAP3Q96P47 875 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 TMEM39BQ9GZU3 492 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 FBXO40Q9UH90 709 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 ATF5Q9Y2D1 282 aaPredicted RBP15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 TMX2Q9Y320 296 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 SLC45A4Q5BKX6 768 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 TEDDM1Q5T9Z0 273 aa15.67■□□□□ 0.1
ARHGEF40-207ENST00000556399 KDM3BQ7LBC6 1761 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 NFIBO00712 420 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 PPP1R11O60927 126 aaPredicted RBP15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 LCP1P13796 627 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 RIPK1Q13546 671 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 PDCD2Q16342 344 aaPredicted RBP15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 PRUNE1Q86TP1 453 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 GALNT4Q8N4A0 578 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 OXNAD1Q96HP4 312 aaPredicted RBP15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 MTMR12Q9C0I1 747 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 ARMCX1Q9P291 453 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 A8MXQ7 604 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 FSCN2O14926 492 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 PSMD10O75832 226 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 TRMT5Q32P41 509 aaKnown RBP15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 FASTKD1Q53R41 847 aaKnown RBP15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 TMPRSS6Q8IU80 811 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 ZFPM1Q8IX07 1006 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 KATNAL2Q8IYT4 538 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 TMA16Q96EY4 203 aaKnown RBP15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 HIC2Q96JB3 615 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 SLCO1B3Q9NPD5 702 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 COG5Q9UP83 839 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 ANKRD63C9JTQ0 380 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 GNGT2O14610 69 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 PAEPP09466 180 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 RFC5P40937 340 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 BAG6P46379 1132 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 HMGCS2P54868 508 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 NME3Q13232 169 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 IRGCQ6NXR0 463 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 MTHFD1LQ6UB35 978 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 C16orf89Q6UX73 402 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 CATSPER4Q7RTX7 472 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 PRMT6Q96LA8 375 aaPredicted RBP15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 MRPL46Q9H2W6 279 aaKnown RBP15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 STAP1Q9ULZ2 295 aa15.66■□□□□ 0.1
ARHGEF40-207ENST00000556399 ENTPD5O75356 428 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 PAMP19021 973 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 CHRNA5P30532 468 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 ELK3P41970 407 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 JAM2P57087 298 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 EFHC2Q5JST6 749 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 SLC9A9Q8IVB4 645 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 KIF12Q96FN5 646 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 CGRRF1Q99675 332 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 NALCNQ8IZF0 1738 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 TOPAZ1Q8N9V7 1692 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 A8MUI8 341 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms