RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CDH9Q9ULB4 789 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 USTQ9Y2C2 406 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 SLC27A5Q9Y2P5 690 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 DOCK6Q96HP0 2047 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 TSC2P49815 1807 aa10.32□□□□□ -0.76
SRP54-210ENST00000556380 NRG2O14511 850 aaPredicted RBP10.31□□□□□ -0.76
SRP54-210ENST00000556380 PRRG1O14668 218 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 XYLBO75191 536 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 FGFR1OPO95684 399 aaKnown RBP10.31□□□□□ -0.76
SRP54-210ENST00000556380 PDGFRBP09619 1106 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 HAPLN1P10915 354 aaPredicted RBP10.31□□□□□ -0.76
SRP54-210ENST00000556380 PIK3CAP42336 1068 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 RAP1GAPP47736 663 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 FMO5P49326 533 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 CDR1P51861 262 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 EPHA5P54756 1037 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 TNNC1P63316 161 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 NTHL1P78549 312 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 TSPY1Q01534 308 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 NFE2Q16621 373 aaPredicted RBP10.31□□□□□ -0.76
SRP54-210ENST00000556380 CCDC40Q4G0X9 1142 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 DCAF17Q5H9S7 520 aaPredicted RBP10.31□□□□□ -0.76
SRP54-210ENST00000556380 GRASPQ7Z6J2 395 aaPredicted RBP10.31□□□□□ -0.76
SRP54-210ENST00000556380 FBXL13Q8NEE6 735 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 LMO3Q8TAP4 145 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 MYCBPAPQ8TBZ2 947 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 RPGRIP1Q96KN7 1286 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 LPIN3Q9BQK8 851 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 LRRC3Q9BY71 257 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 MMRN2Q9H8L6 949 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 ABCB6Q9NP58 842 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 HCFC1R1Q9NWW0 138 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 YIPF1Q9Y548 306 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 CLUHO75153 1309 aa10.31□□□□□ -0.76
SRP54-210ENST00000556380 NOTCH4Q99466 2003 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 C2CD4DB7Z1M9 353 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 LCE2BO14633 110 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 P4HA2O15460 535 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 SOAT2O75908 522 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 S1PR4O95977 384 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 P4HA1P13674 534 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 PTPN1P18031 435 aaKnown RBP10.3□□□□□ -0.76
SRP54-210ENST00000556380 ATF6P18850 670 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 TUFMP49411 452 aaKnown RBP10.3□□□□□ -0.76
SRP54-210ENST00000556380 NOP14P78316 857 aaKnown RBP10.3□□□□□ -0.76
SRP54-210ENST00000556380 INCA1Q0VD86 236 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 TWF1Q12792 350 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 CFAP221Q4G0U5 840 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 PRSS36Q5K4E3 855 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 TCERG1LQ5VWI1 586 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 ZDHHC14Q8IZN3 488 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 CRYBG2Q8N1P7 616 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 OR6B3Q8NGW1 331 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 ITFG1Q8TB96 612 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 ENOX1Q8TC92 643 aaKnown RBP10.3□□□□□ -0.76
SRP54-210ENST00000556380 SPPL2BQ8TCT7 592 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 WHAMMQ8TF30 809 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 MYADMQ96S97 322 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 SYT15Q9BQS2 421 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 NIF3L1Q9GZT8 377 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 SNX25Q9H3E2 840 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 DPEP3Q9H4B8 488 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 THAP9Q9H5L6 903 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 CYP3A43Q9HB55 503 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 PIDD1Q9HB75 910 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.3□□□□□ -0.76
SRP54-210ENST00000556380 DACH1Q9UI36 760 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 PCDHB5Q9Y5E4 795 aa10.3□□□□□ -0.76
SRP54-210ENST00000556380 A8MXQ7 604 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 MOSPD3O75425 235 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 MICAL2O94851 1124 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 LRG1P02750 347 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 AFPP02771 609 aaKnown RBP10.29□□□□□ -0.76
SRP54-210ENST00000556380 RHOP08100 348 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 CCDC192P0DO97 292 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 PTPN2P17706 415 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 CYP2F1P24903 491 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 CCR2P41597 374 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 MAGEA11P43364 429 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 ALDH1A3P47895 512 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 PSMC1P62191 440 aaKnown RBP10.29□□□□□ -0.76
SRP54-210ENST00000556380 KCNH2Q12809 1159 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 PLD1Q13393 1074 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 SLC5A9Q2M3M2 681 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 KLHL40Q2TBA0 621 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 PABPC1LQ4VXU2 614 aaKnown RBP10.29□□□□□ -0.76
SRP54-210ENST00000556380 SCARA5Q6ZMJ2 495 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 PAQR9Q6ZVX9 377 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 OTOP3Q7RTS5 596 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 DNAJB7Q7Z6W7 309 aaPredicted RBP10.29□□□□□ -0.76
SRP54-210ENST00000556380 UNC93AQ86WB7 457 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 TMC8Q8IU68 726 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 GPIHBP1Q8IV16 184 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 SCUBE3Q8IX30 993 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 UBR7Q8N806 425 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 B3GALNT2Q8NCR0 500 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 PSMG2Q969U7 264 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 MYLPFQ96A32 169 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 PCED1BQ96HM7 432 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 FUBP3Q96I24 572 aaKnown RBP eCLIP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms