RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 CYP2F1P24903 491 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 PCSK1P29120 753 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 HOXA6P31267 233 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 LHX1P48742 406 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 RUNX3Q13761 415 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 ZNF268Q14587 947 aaPredicted RBP20.2■□□□□ 0.82
CDKN3-209ENST00000556102 STK38Q15208 465 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 TRMT2BQ96GJ1 504 aaKnown RBP20.2■□□□□ 0.82
CDKN3-209ENST00000556102 MYRFLQ96LU7 910 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 LRRC27Q9C0I9 530 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 TNMDQ9H2S6 317 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 INTS13Q9NVM9 706 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 C2orf42Q9NWW7 574 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 GTF3C4Q9UKN8 822 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 CDV3Q9UKY7 258 aaKnown RBP20.2■□□□□ 0.82
CDKN3-209ENST00000556102 R3HCC1Q9Y3T6 440 aaKnown RBP20.2■□□□□ 0.82
CDKN3-209ENST00000556102 SPAG17Q6Q759 2223 aa20.19■□□□□ 0.82
CDKN3-209ENST00000556102 TADA3O75528 432 aa20.19■□□□□ 0.82
CDKN3-209ENST00000556102 ATXN1P54253 815 aaKnown RBP20.19■□□□□ 0.82
CDKN3-209ENST00000556102 SPEM2Q0P670 501 aa20.19■□□□□ 0.82
CDKN3-209ENST00000556102 MYO1EQ12965 1108 aa20.19■□□□□ 0.82
CDKN3-209ENST00000556102 SURF1Q15526 300 aa20.19■□□□□ 0.82
CDKN3-209ENST00000556102 CFAP221Q4G0U5 840 aa20.19■□□□□ 0.82
CDKN3-209ENST00000556102 TMEM196Q5HYL7 178 aa20.19■□□□□ 0.82
CDKN3-209ENST00000556102 LMBRD2Q68DH5 695 aaPredicted RBP20.19■□□□□ 0.82
CDKN3-209ENST00000556102 HEATR6Q6AI08 1181 aaKnown RBP20.19■□□□□ 0.82
CDKN3-209ENST00000556102 DPH6Q7L8W6 267 aa20.19■□□□□ 0.82
CDKN3-209ENST00000556102 SPATA2LQ8IUW3 424 aaPredicted RBP20.19■□□□□ 0.82
CDKN3-209ENST00000556102 LINC00301Q8NCQ3 95 aa20.19■□□□□ 0.82
CDKN3-209ENST00000556102 FUBP3Q96I24 572 aaKnown RBP eCLIP20.19■□□□□ 0.82
CDKN3-209ENST00000556102 EBF3Q9H4W6 596 aa20.19■□□□□ 0.82
CDKN3-209ENST00000556102 FOXD4L1Q9NU39 408 aa20.19■□□□□ 0.82
CDKN3-209ENST00000556102 ZNF233A6NK53 670 aa20.18■□□□□ 0.82
CDKN3-209ENST00000556102 TRDMT1O14717 391 aaKnown RBP20.18■□□□□ 0.82
CDKN3-209ENST00000556102 HCRTO43612 131 aa20.18■□□□□ 0.82
CDKN3-209ENST00000556102 AMPD2Q01433 879 aa20.18■□□□□ 0.82
CDKN3-209ENST00000556102 GRSF1Q12849 480 aaKnown RBP eCLIP20.18■□□□□ 0.82
CDKN3-209ENST00000556102 SRSF5Q13243 272 aaKnown RBP20.18■□□□□ 0.82
CDKN3-209ENST00000556102 E2F4Q16254 413 aa20.18■□□□□ 0.82
CDKN3-209ENST00000556102 CCDC142Q17RM4 750 aa20.18■□□□□ 0.82
CDKN3-209ENST00000556102 SOWAHAQ2M3V2 549 aa20.18■□□□□ 0.82
CDKN3-209ENST00000556102 TRIM68Q6AZZ1 485 aa20.18■□□□□ 0.82
CDKN3-209ENST00000556102 CC2D1AQ6P1N0 951 aaPredicted RBP20.18■□□□□ 0.82
CDKN3-209ENST00000556102 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.18■□□□□ 0.82
CDKN3-209ENST00000556102 WDR5BQ86VZ2 330 aa20.18■□□□□ 0.82
CDKN3-209ENST00000556102 GLIS3Q8NEA6 775 aa20.18■□□□□ 0.82
CDKN3-209ENST00000556102 OR5B17Q8NGF7 314 aa20.18■□□□□ 0.82
CDKN3-209ENST00000556102 RIN3Q8TB24 985 aa20.18■□□□□ 0.82
CDKN3-209ENST00000556102 CUEDC2Q9H467 287 aa20.18■□□□□ 0.82
CDKN3-209ENST00000556102 KBTBD4Q9NVX7 518 aa20.18■□□□□ 0.82
CDKN3-209ENST00000556102 PTPRJQ12913 1337 aa20.18■□□□□ 0.82
CDKN3-209ENST00000556102 PTPRDP23468 1912 aa20.17■□□□□ 0.82
CDKN3-209ENST00000556102 OTOL1A6NHN0 477 aaPredicted RBP20.17■□□□□ 0.82
CDKN3-209ENST00000556102 TNNC2P02585 160 aa20.17■□□□□ 0.82
CDKN3-209ENST00000556102 MAGEA11P43364 429 aa20.17■□□□□ 0.82
CDKN3-209ENST00000556102 FAM160A1Q05DH4 1040 aa20.17■□□□□ 0.82
CDKN3-209ENST00000556102 PDGFRLQ15198 375 aa20.17■□□□□ 0.82
CDKN3-209ENST00000556102 DUOXA2Q1HG44 320 aa20.17■□□□□ 0.82
CDKN3-209ENST00000556102 FSTL4Q6MZW2 842 aa20.17■□□□□ 0.82
CDKN3-209ENST00000556102 FAM171BQ6P995 826 aa20.17■□□□□ 0.82
CDKN3-209ENST00000556102 LIMS2Q7Z4I7 341 aa20.17■□□□□ 0.82
CDKN3-209ENST00000556102 CBWD2Q8IUF1 395 aa20.17■□□□□ 0.82
CDKN3-209ENST00000556102 HPS3Q969F9 1004 aa20.17■□□□□ 0.82
CDKN3-209ENST00000556102 CHFRQ96EP1 664 aa20.17■□□□□ 0.82
CDKN3-209ENST00000556102 HPDLQ96IR7 371 aa20.17■□□□□ 0.82
CDKN3-209ENST00000556102 RTKNQ9BST9 563 aa20.17■□□□□ 0.82
CDKN3-209ENST00000556102 TRIM9Q9C026 710 aa20.17■□□□□ 0.82
CDKN3-209ENST00000556102 KIAA1586Q9HCI6 787 aa20.17■□□□□ 0.82
CDKN3-209ENST00000556102 HSPBP1Q9NZL4 362 aa20.17■□□□□ 0.82
CDKN3-209ENST00000556102 HELZP42694 1942 aaKnown RBP20.16■□□□□ 0.82
CDKN3-209ENST00000556102 K7ELQ4 463 aaPredicted RBP20.16■□□□□ 0.82
CDKN3-209ENST00000556102 SPTLC2O15270 562 aa20.16■□□□□ 0.82
CDKN3-209ENST00000556102 EIF3DO15371 548 aaKnown RBP eCLIP20.16■□□□□ 0.82
CDKN3-209ENST00000556102 PPP6R2O75170 966 aa20.16■□□□□ 0.82
CDKN3-209ENST00000556102 ARSAP15289 507 aa20.16■□□□□ 0.82
CDKN3-209ENST00000556102 AMPD3Q01432 767 aa20.16■□□□□ 0.82
CDKN3-209ENST00000556102 MTF1Q14872 753 aa20.16■□□□□ 0.82
CDKN3-209ENST00000556102 PKN3Q6P5Z2 889 aa20.16■□□□□ 0.82
CDKN3-209ENST00000556102 C4orf50Q6ZRC1 276 aa20.16■□□□□ 0.82
CDKN3-209ENST00000556102 CEP68Q76N32 757 aa20.16■□□□□ 0.82
CDKN3-209ENST00000556102 SCN4BQ8IWT1 228 aa20.16■□□□□ 0.82
CDKN3-209ENST00000556102 KBTBD7Q8WVZ9 684 aa20.16■□□□□ 0.82
CDKN3-209ENST00000556102 SYT15Q9BQS2 421 aa20.16■□□□□ 0.82
CDKN3-209ENST00000556102 TRPC7Q9HCX4 862 aa20.16■□□□□ 0.82
CDKN3-209ENST00000556102 SEMA4GQ9NTN9 838 aa20.16■□□□□ 0.82
CDKN3-209ENST00000556102 CDH9Q9ULB4 789 aa20.16■□□□□ 0.82
CDKN3-209ENST00000556102 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.16■□□□□ 0.82
CDKN3-209ENST00000556102 SDK1Q7Z5N4 2213 aa20.16■□□□□ 0.82
CDKN3-209ENST00000556102 TRAV19A0A0A6YYK7 116 aa20.15■□□□□ 0.82
CDKN3-209ENST00000556102 ATG13O75143 517 aa20.15■□□□□ 0.82
CDKN3-209ENST00000556102 ATP2C2O75185 946 aa20.15■□□□□ 0.82
CDKN3-209ENST00000556102 CKMP06732 381 aa20.15■□□□□ 0.82
CDKN3-209ENST00000556102 USP17L7P0C7H9 530 aa20.15■□□□□ 0.82
CDKN3-209ENST00000556102 HOXC13P31276 330 aa20.15■□□□□ 0.82
CDKN3-209ENST00000556102 HOXD13P35453 343 aa20.15■□□□□ 0.82
CDKN3-209ENST00000556102 ASIC1P78348 528 aa20.15■□□□□ 0.82
CDKN3-209ENST00000556102 USP4Q13107 963 aa20.15■□□□□ 0.82
CDKN3-209ENST00000556102 ZNF77Q15935 545 aa20.15■□□□□ 0.82
CDKN3-209ENST00000556102 CSRP2Q16527 193 aa20.15■□□□□ 0.82
CDKN3-209ENST00000556102 WDR49Q8IV35 697 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms