RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ASAP3Q8TDY4 903 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 PRPF31Q8WWY3 499 aaKnown RBP7.32□□□□□ -1.24
SLIRP-204ENST00000555890 COPS5Q92905 334 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 SCLYQ96I15 445 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 FAM81BQ96LP2 452 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 CEP89Q96ST8 783 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 NAPGQ99747 312 aaPredicted RBP7.32□□□□□ -1.24
SLIRP-204ENST00000555890 KIFC3Q9BVG8 833 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 UPF3AQ9H1J1 476 aaKnown RBP7.32□□□□□ -1.24
SLIRP-204ENST00000555890 ABHD16BQ9H3Z7 469 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 PIF1Q9H611 641 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 SIX2Q9NPC8 291 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 ZDHHC3Q9NYG2 299 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 DMGDHQ9UI17 866 aaKnown RBP7.32□□□□□ -1.24
SLIRP-204ENST00000555890 AGO2Q9UKV8 859 aaKnown RBP7.32□□□□□ -1.24
SLIRP-204ENST00000555890 ZNF215Q9UL58 517 aaPredicted RBP7.32□□□□□ -1.24
SLIRP-204ENST00000555890 REXO2Q9Y3B8 237 aaKnown RBP7.32□□□□□ -1.24
SLIRP-204ENST00000555890 STYXL1Q9Y6J8 313 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 WASF2Q9Y6W5 498 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 ADAMTS20P59510 1910 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 RALGAPA2Q2PPJ7 1873 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 COL1A2P08123 1366 aa7.32□□□□□ -1.24
SLIRP-204ENST00000555890 MROH7Q68CQ1 1323 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 ADGRA3Q8IWK6 1321 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 IGKV6-21A0A0C4DH24 114 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 A0A0U1RQG5 324 aaPredicted RBP7.31□□□□□ -1.24
SLIRP-204ENST00000555890 RBAK-RBAKDNI3L0D1 243 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 PJA2O43164 708 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 CTIFO43310 598 aaKnown RBP7.31□□□□□ -1.24
SLIRP-204ENST00000555890 PHACTR2O75167 634 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 DUSP11O75319 330 aaKnown RBP7.31□□□□□ -1.24
SLIRP-204ENST00000555890 TACC1O75410 805 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 PLEKP08567 350 aaPredicted RBP7.31□□□□□ -1.24
SLIRP-204ENST00000555890 ADSSP30520 456 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 GPC1P35052 558 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 SOX5P35711 763 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 LTBRP36941 435 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 PRKCIP41743 596 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 PLA2G4AP47712 749 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 GCLMP48507 274 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 IDH3AP50213 366 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 JAM2P57087 298 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 GJA9P57773 515 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 TUBB4BP68371 445 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 DLG4P78352 724 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 RELBQ01201 579 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 CYP27A1Q02318 531 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 CYP24A1Q07973 514 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 PPP3CAQ08209 521 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 LAMTOR4Q0VGL1 99 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 ACVR2BQ13705 512 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 CAPSQ13938 189 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 SLC18A3Q16572 532 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 MAPK6Q16659 721 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 PTPROQ16827 1216 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 ASTE1Q2TB18 679 aaPredicted RBP7.31□□□□□ -1.24
SLIRP-204ENST00000555890 DUSP28Q4G0W2 176 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 CBWD6Q4V339 395 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 CBWD3Q5JTY5 395 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 CBWD5Q5RIA9 395 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 HGSNATQ68CP4 663 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 KRT39Q6A163 491 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 IL31Q6EBC2 164 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 DPY19L2P1Q6NXN4 242 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 IRF2BP2Q7Z5L9 587 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 CBWD2Q8IUF1 395 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 RPUSD2Q8IZ73 545 aaKnown RBP7.31□□□□□ -1.24
SLIRP-204ENST00000555890 SLC35F6Q8N357 371 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 RNF10Q8N5U6 811 aaKnown RBP7.31□□□□□ -1.24
SLIRP-204ENST00000555890 PHOSPHO2Q8TCD6 241 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 PARD3BQ8TEW8 1205 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 CCDC127Q96BQ5 260 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 SAAL1Q96ER3 474 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 SUSD3Q96L08 255 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 GLT1D1Q96MS3 346 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 WDR24Q96S15 920 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 UBL7Q96S82 380 aaPredicted RBP7.31□□□□□ -1.24
SLIRP-204ENST00000555890 FAM213AQ9BRX8 229 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 MRPL4Q9BYD3 311 aaKnown RBP7.31□□□□□ -1.24
SLIRP-204ENST00000555890 GRIP2Q9C0E4 1043 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 TRPV6Q9H1D0 765 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 HIPK3Q9H422 1215 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 TMEM8AQ9HCN3 771 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 SUCLA2Q9P2R7 463 aaPredicted RBP7.31□□□□□ -1.24
SLIRP-204ENST00000555890 APEX2Q9UBZ4 518 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 ZHX1Q9UKY1 873 aaPredicted RBP7.31□□□□□ -1.24
SLIRP-204ENST00000555890 USP20Q9Y2K6 914 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 FHOD1Q9Y613 1164 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 MYH10P35580 1976 aa7.31□□□□□ -1.24
SLIRP-204ENST00000555890 LGALS2P05162 132 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 ADRB2P07550 413 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 SRGAP2CP0DJJ0 459 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 AOC1P19801 751 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 TMOD1P28289 359 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 ARSDP51689 593 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 AP3M2P53677 418 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 MFAP3P55082 362 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 PRR20EP86478 221 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 PRR20CP86479 221 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 PRR20DP86480 221 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms