RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 RUFY3Q7L099 469 aa9.91□□□□□ -0.82
PRKCH-218ENST00000555628 RASSF3Q86WH2 238 aa9.91□□□□□ -0.82
PRKCH-218ENST00000555628 ATAD1Q8NBU5 361 aa9.91□□□□□ -0.82
PRKCH-218ENST00000555628 DEPTORQ8TB45 409 aa9.91□□□□□ -0.82
PRKCH-218ENST00000555628 FAM200AQ8TCP9 573 aa9.91□□□□□ -0.82
PRKCH-218ENST00000555628 PGLYRP2Q96PD5 576 aa9.91□□□□□ -0.82
PRKCH-218ENST00000555628 BBC3Q96PG8 261 aaPredicted RBP9.91□□□□□ -0.82
PRKCH-218ENST00000555628 SLC46A2Q9BY10 475 aa9.91□□□□□ -0.82
PRKCH-218ENST00000555628 GDPD2Q9HCC8 539 aa9.91□□□□□ -0.82
PRKCH-218ENST00000555628 PGPEP1Q9NXJ5 209 aa9.91□□□□□ -0.82
PRKCH-218ENST00000555628 HSFX1Q9UBD0 423 aa9.91□□□□□ -0.82
PRKCH-218ENST00000555628 EVLQ9UI08 416 aaPredicted RBP9.91□□□□□ -0.82
PRKCH-218ENST00000555628 TPCN1Q9ULQ1 816 aa9.91□□□□□ -0.82
PRKCH-218ENST00000555628 PLXNB3Q9ULL4 1909 aa9.91□□□□□ -0.82
PRKCH-218ENST00000555628 OR6C75A6NL08 312 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 CPLX1O14810 134 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 LILRA1O75019 489 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 RHOBTB1O94844 696 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 MCF2P10911 925 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 BMP2P12643 396 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 FDPSP14324 419 aaKnown RBP9.9□□□□□ -0.82
PRKCH-218ENST00000555628 ARSAP15289 507 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 LIG1P18858 919 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 GABRR2P28476 465 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 MCM4P33991 863 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 EPHB3P54753 998 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 YWHAHQ04917 246 aaPredicted RBP9.9□□□□□ -0.82
PRKCH-218ENST00000555628 DHX9Q08211 1270 aaKnown RBP9.9□□□□□ -0.82
PRKCH-218ENST00000555628 GRSF1Q12849 480 aaKnown RBP eCLIP9.9□□□□□ -0.82
PRKCH-218ENST00000555628 MAPK7Q13164 816 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 SEMA3BQ13214 749 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 RUNX3Q13761 415 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 MYBPC2Q14324 1141 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 PPP2R5AQ15172 486 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 ECM1Q16610 540 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 LCE2AQ5TA79 106 aaPredicted RBP9.9□□□□□ -0.82
PRKCH-218ENST00000555628 PEAR1Q5VY43 1037 aaPredicted RBP9.9□□□□□ -0.82
PRKCH-218ENST00000555628 HAUS6Q7Z4H7 955 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 LINC00528Q8N1L1 170 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 OR10T2Q8NGX3 314 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 OLIG1Q8TAK6 271 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 USP13Q92995 863 aaPredicted RBP9.9□□□□□ -0.82
PRKCH-218ENST00000555628 CCDC43Q96MW1 224 aaKnown RBP9.9□□□□□ -0.82
PRKCH-218ENST00000555628 NACC1Q96RE7 527 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 CCDC94Q9BW85 323 aaPredicted RBP9.9□□□□□ -0.82
PRKCH-218ENST00000555628 OXCT2Q9BYC2 517 aaPredicted RBP9.9□□□□□ -0.82
PRKCH-218ENST00000555628 EBF3Q9H4W6 596 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 POLD4Q9HCU8 107 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 GKN1Q9NS71 199 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 NUB1Q9Y5A7 615 aa9.9□□□□□ -0.82
PRKCH-218ENST00000555628 TIMM13Q9Y5L4 95 aaPredicted RBP9.9□□□□□ -0.82
PRKCH-218ENST00000555628 ANTXRLA6NF34 631 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 KHNYNO15037 678 aaKnown RBP9.89□□□□□ -0.83
PRKCH-218ENST00000555628 FAM189A1O60320 539 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 MARCH6O60337 910 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 FGF19O95750 216 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 HMGA1P17096 107 aaKnown RBP9.89□□□□□ -0.83
PRKCH-218ENST00000555628 DRD1P21728 446 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 RPA1P27694 616 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 TXKP42681 527 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 NPTX2P47972 431 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 YARSP54577 528 aaKnown RBP9.89□□□□□ -0.83
PRKCH-218ENST00000555628 OSTNP61366 133 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 DMC1Q14565 340 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 TMEM132AQ24JP5 1023 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 FBXO43Q4G163 708 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 LCE2CQ5TA81 110 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 TREML4Q6UXN2 200 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 RAB44Q7Z6P3 723 aaPredicted RBP9.89□□□□□ -0.83
PRKCH-218ENST00000555628 PDZD3Q86UT5 571 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 CMTM8Q8IZV2 173 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 RPLP0P6Q8NHW5 317 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 LPIN3Q9BQK8 851 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 TARS2Q9BW92 718 aaKnown RBP9.89□□□□□ -0.83
PRKCH-218ENST00000555628 HAPLN2Q9GZV7 340 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 ATXN3LQ9H3M9 355 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 CACNA2D2Q9NY47 1150 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 SCN1AP35498 2009 aa9.89□□□□□ -0.83
PRKCH-218ENST00000555628 ASXL3Q9C0F0 2248 aa9.88□□□□□ -0.83
PRKCH-218ENST00000555628 ZNF638Q14966 1978 aaKnown RBP9.88□□□□□ -0.83
PRKCH-218ENST00000555628 HELZP42694 1942 aaKnown RBP9.88□□□□□ -0.83
PRKCH-218ENST00000555628 ANAPC1Q9H1A4 1944 aa9.88□□□□□ -0.83
PRKCH-218ENST00000555628 ZNF462Q96JM2 2506 aa9.88□□□□□ -0.83
PRKCH-218ENST00000555628 ATMQ13315 3056 aa9.88□□□□□ -0.83
PRKCH-218ENST00000555628 SPAARA0A1B0GVQ0 90 aa9.88□□□□□ -0.83
PRKCH-218ENST00000555628 TTC26A0AVF1 554 aa9.88□□□□□ -0.83
PRKCH-218ENST00000555628 PPEF2O14830 753 aa9.88□□□□□ -0.83
PRKCH-218ENST00000555628 TADA3O75528 432 aa9.88□□□□□ -0.83
PRKCH-218ENST00000555628 HNRNPLP14866 589 aaKnown RBP eCLIP9.88□□□□□ -0.83
PRKCH-218ENST00000555628 TYMPP19971 482 aa9.88□□□□□ -0.83
PRKCH-218ENST00000555628 U2AF2P26368 475 aaKnown RBP eCLIP9.88□□□□□ -0.83
PRKCH-218ENST00000555628 PSMA5P28066 241 aa9.88□□□□□ -0.83
PRKCH-218ENST00000555628 GJA4P35212 333 aa9.88□□□□□ -0.83
PRKCH-218ENST00000555628 ALDH1A3P47895 512 aa9.88□□□□□ -0.83
PRKCH-218ENST00000555628 GALK1P51570 392 aa9.88□□□□□ -0.83
PRKCH-218ENST00000555628 FAM193AP78312 1265 aa9.88□□□□□ -0.83
PRKCH-218ENST00000555628 STK3Q13188 491 aa9.88□□□□□ -0.83
PRKCH-218ENST00000555628 MCM6Q14566 821 aa9.88□□□□□ -0.83
PRKCH-218ENST00000555628 GAB4Q2WGN9 574 aa9.88□□□□□ -0.83
PRKCH-218ENST00000555628 MPZL3Q6UWV2 235 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms