RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ZNF585BQ52M93 769 aa4.15□□□□□ -1.75
SRP54-207ENST00000555535 FCRL6Q6DN72 434 aa4.15□□□□□ -1.75
SRP54-207ENST00000555535 KIRREL2Q6UWL6 708 aa4.15□□□□□ -1.75
SRP54-207ENST00000555535 PIP4P1Q86T03 277 aa4.15□□□□□ -1.75
SRP54-207ENST00000555535 LRRC71Q8N4P6 559 aa4.15□□□□□ -1.75
SRP54-207ENST00000555535 ARFGAP1Q8N6T3 406 aa4.15□□□□□ -1.75
SRP54-207ENST00000555535 PSD4Q8NDX1 1056 aa4.15□□□□□ -1.75
SRP54-207ENST00000555535 COG1Q8WTW3 980 aa4.15□□□□□ -1.75
SRP54-207ENST00000555535 RAB24Q969Q5 203 aa4.15□□□□□ -1.75
SRP54-207ENST00000555535 TMX3Q96JJ7 454 aa4.15□□□□□ -1.75
SRP54-207ENST00000555535 SNX18Q96RF0 628 aa4.15□□□□□ -1.75
SRP54-207ENST00000555535 MEIS3Q99687 375 aa4.15□□□□□ -1.75
SRP54-207ENST00000555535 ZPBPQ9BS86 351 aa4.15□□□□□ -1.75
SRP54-207ENST00000555535 CNPPD1Q9BV87 410 aa4.15□□□□□ -1.75
SRP54-207ENST00000555535 GPR45Q9Y5Y3 372 aa4.15□□□□□ -1.75
SRP54-207ENST00000555535 E9PLN8 166 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 A1BGP04217 495 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 SOX5P35711 763 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 WASP42768 502 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 CDC42EP1Q00587 391 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 FAPQ12884 760 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 ASIC2Q16515 512 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 TAF2Q6P1X5 1199 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 ZNF549Q6P9A3 640 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 ABHD11Q8NFV4 315 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 NRG4Q8WWG1 115 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 FAM84BQ96KN1 310 aaPredicted RBP4.14□□□□□ -1.75
SRP54-207ENST00000555535 SIGLEC11Q96RL6 698 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 MACROD1Q9BQ69 325 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 VKORC1Q9BQB6 163 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 TMEM204Q9BSN7 226 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 TINAGL1Q9GZM7 467 aaPredicted RBP4.14□□□□□ -1.75
SRP54-207ENST00000555535 ZNF277Q9NRM2 450 aaPredicted RBP4.14□□□□□ -1.75
SRP54-207ENST00000555535 RLIMQ9NVW2 624 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 ETAA1Q9NY74 926 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 INTUQ9ULD6 942 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 SLC45A2Q9UMX9 530 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 HS3ST3B1Q9Y662 390 aa4.14□□□□□ -1.75
SRP54-207ENST00000555535 PPM1DO15297 605 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 GPR39O43194 453 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 SLC28A2O43868 658 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 TJP3O95049 919 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 IGKV3-20P01619 116 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 AGXTP21549 392 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 PDE1AP54750 535 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 ZXDBP98169 803 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 TARDBPQ13148 414 aaKnown RBP eCLIP4.13□□□□□ -1.75
SRP54-207ENST00000555535 RAB39AQ14964 217 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 TREML2Q5T2D2 321 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 ICE2Q659A1 982 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 SERPINA13PQ6UXR4 307 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 COLCA1Q6ZS62 124 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 MIGA2Q7L4E1 593 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 PPM1NQ8N819 430 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 MPLKIPQ8TAP9 179 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 IFI44Q8TCB0 444 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 CHAC2Q8WUX2 184 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 DNASE2BQ8WZ79 361 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 SERHLQ9NQF3 203 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 TFCP2L1Q9NZI6 479 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 SAP30BPQ9UHR5 308 aaKnown RBP4.13□□□□□ -1.75
SRP54-207ENST00000555535 ERRFI1Q9UJM3 462 aaPredicted RBP4.13□□□□□ -1.75
SRP54-207ENST00000555535 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.13□□□□□ -1.75
SRP54-207ENST00000555535 RAD54BQ9Y620 910 aa4.13□□□□□ -1.75
SRP54-207ENST00000555535 TMEM232C9JQI7 657 aa4.12□□□□□ -1.75
SRP54-207ENST00000555535 SGTAO43765 313 aa4.12□□□□□ -1.75
SRP54-207ENST00000555535 DLDP09622 509 aaKnown RBP4.12□□□□□ -1.75
SRP54-207ENST00000555535 HOXD9P28356 352 aaPredicted RBP4.12□□□□□ -1.75
SRP54-207ENST00000555535 GPSM2P81274 684 aa4.12□□□□□ -1.75
SRP54-207ENST00000555535 ID2Q02363 134 aa4.12□□□□□ -1.75
SRP54-207ENST00000555535 VPS53Q5VIR6 699 aa4.12□□□□□ -1.75
SRP54-207ENST00000555535 NOP9Q86U38 636 aaKnown RBP4.12□□□□□ -1.75
SRP54-207ENST00000555535 TERB1Q8NA31 727 aa4.12□□□□□ -1.75
SRP54-207ENST00000555535 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.12□□□□□ -1.75
SRP54-207ENST00000555535 FYTTD1Q96QD9 318 aaKnown RBP4.12□□□□□ -1.75
SRP54-207ENST00000555535 FAM126AQ9BYI3 521 aaPredicted RBP4.12□□□□□ -1.75
SRP54-207ENST00000555535 SMOC2Q9H3U7 446 aa4.12□□□□□ -1.75
SRP54-207ENST00000555535 PCDHA13Q9Y5I0 950 aa4.12□□□□□ -1.75
SRP54-207ENST00000555535 NOTCH3Q9UM47 2321 aa4.12□□□□□ -1.75
SRP54-207ENST00000555535 TLR2O60603 784 aa4.11□□□□□ -1.75
SRP54-207ENST00000555535 RNF8O76064 485 aa4.11□□□□□ -1.75
SRP54-207ENST00000555535 LIPAP38571 399 aa4.11□□□□□ -1.75
SRP54-207ENST00000555535 C4orf46Q504U0 113 aa4.11□□□□□ -1.75
SRP54-207ENST00000555535 ANO7Q6IWH7 933 aa4.11□□□□□ -1.75
SRP54-207ENST00000555535 PDXDC1Q6P996 788 aa4.11□□□□□ -1.75
SRP54-207ENST00000555535 ANKRD13BQ86YJ7 626 aa4.11□□□□□ -1.75
SRP54-207ENST00000555535 RFX6Q8HWS3 928 aa4.11□□□□□ -1.75
SRP54-207ENST00000555535 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.11□□□□□ -1.75
SRP54-207ENST00000555535 WDR66Q8TBY9 1149 aa4.11□□□□□ -1.75
SRP54-207ENST00000555535 MLXIPQ9HAP2 919 aa4.11□□□□□ -1.75
SRP54-207ENST00000555535 GJB4Q9NTQ9 266 aa4.11□□□□□ -1.75
SRP54-207ENST00000555535 HEY2Q9UBP5 337 aa4.11□□□□□ -1.75
SRP54-207ENST00000555535 TUBD1Q9UJT1 453 aa4.11□□□□□ -1.75
SRP54-207ENST00000555535 TLDC2A0PJX2 215 aa4.1□□□□□ -1.75
SRP54-207ENST00000555535 BTBD19C9JJ37 291 aa4.1□□□□□ -1.75
SRP54-207ENST00000555535 K7ESF4 209 aa4.1□□□□□ -1.75
SRP54-207ENST00000555535 EXOC3O60645 756 aa4.1□□□□□ -1.75
SRP54-207ENST00000555535 CNOT3O75175 753 aaKnown RBP4.1□□□□□ -1.75
SRP54-207ENST00000555535 PDHA1P08559 390 aa4.1□□□□□ -1.75
SRP54-207ENST00000555535 GNAI3P08754 354 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms