RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 TFF2Q03403 129 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 CCDC142Q17RM4 750 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 SLC39A12Q504Y0 691 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 WDR44Q5JSH3 913 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 WDR59Q6PJI9 974 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 TMCO3Q6UWJ1 677 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 EFHBQ8N7U6 833 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 OR10T2Q8NGX3 314 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 TATDN2Q93075 761 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 EIF3CQ99613 913 aaKnown RBP10.51□□□□□ -0.73
PSEN1-213ENST00000555386 UBE2ZQ9H832 354 aaPredicted RBP10.51□□□□□ -0.73
PSEN1-213ENST00000555386 RXFP1Q9HBX9 757 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 APOBEC3GQ9HC16 384 aaKnown RBP10.51□□□□□ -0.73
PSEN1-213ENST00000555386 MAN1C1Q9NR34 630 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 GDAP2Q9NXN4 497 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 DDX43Q9NXZ2 648 aaKnown RBP10.51□□□□□ -0.73
PSEN1-213ENST00000555386 FNIP2Q9P278 1114 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 IRAK3Q9Y616 596 aa10.51□□□□□ -0.73
PSEN1-213ENST00000555386 PRRG1O14668 218 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 KRT86O43790 486 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 ATP2C2O75185 946 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 TBX10O75333 385 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 OAZ2O95190 189 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 ASS1P00966 412 aaKnown RBP10.5□□□□□ -0.73
PSEN1-213ENST00000555386 CYP11A1P05108 521 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 P4HA1P13674 534 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 LMO2P25791 158 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 ELF1P32519 619 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 GNL1P36915 607 aaPredicted RBP10.5□□□□□ -0.73
PSEN1-213ENST00000555386 CLCN6P51797 869 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 MARSP56192 900 aaKnown RBP10.5□□□□□ -0.73
PSEN1-213ENST00000555386 FAM193AP78312 1265 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 CBX1P83916 185 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 ROR1Q01973 937 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 GABPB1Q06547 395 aaPredicted RBP10.5□□□□□ -0.73
PSEN1-213ENST00000555386 ADCY1Q08828 1119 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 CETN1Q12798 172 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 ADAM15Q13444 863 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 MRPL58Q14197 206 aaKnown RBP10.5□□□□□ -0.73
PSEN1-213ENST00000555386 RARS2Q5T160 578 aaKnown RBP10.5□□□□□ -0.73
PSEN1-213ENST00000555386 RNF19BQ6ZMZ0 732 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 DPH6Q7L8W6 267 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 SLC35F6Q8N357 371 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 TOP6BLQ8N6T0 577 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 KREMEN2Q8NCW0 462 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 FEZF2Q8TBJ5 459 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 SLC22A17Q8WUG5 538 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 KBTBD7Q8WVZ9 684 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 HLA-CQ95604 372 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 PABPC5Q96DU9 382 aaKnown RBP10.5□□□□□ -0.73
PSEN1-213ENST00000555386 CDCA3Q99618 268 aaPredicted RBP10.5□□□□□ -0.73
PSEN1-213ENST00000555386 CHP1Q99653 195 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 LPIN3Q9BQK8 851 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 RTP3Q9BQQ7 232 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 TSGA10Q9BZW7 698 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 SDCBP2Q9H190 292 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 NDST4Q9H3R1 872 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 CDH22Q9UJ99 828 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 BACE2Q9Y5Z0 518 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 C2orf16Q68DN1 1984 aa10.5□□□□□ -0.73
PSEN1-213ENST00000555386 WDR27A2RRH5 827 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 OR6C75A6NL08 312 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 A8MXQ7 604 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 N4BP1O75113 896 aaKnown RBP10.49□□□□□ -0.73
PSEN1-213ENST00000555386 RFPL2O75678 378 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 ZRANB2O95218 330 aaKnown RBP eCLIP10.49□□□□□ -0.73
PSEN1-213ENST00000555386 SRGAP2BP0DMP2 458 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 PAX3P23760 479 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 TSPY1Q01534 308 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 APBA1Q02410 837 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 ENPEPQ07075 957 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 BRD3Q15059 726 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 ZNF394Q53GI3 561 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 LIN9Q5TKA1 542 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 TMC5Q6UXY8 1006 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 TMEM86AQ8N2M4 240 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 TXLNBQ8N3L3 684 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 CASP10Q92851 521 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 PCMTD1Q96MG8 357 aaPredicted RBP10.49□□□□□ -0.73
PSEN1-213ENST00000555386 ARID3AQ99856 593 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 IRX2Q9BZI1 471 aaPredicted RBP10.49□□□□□ -0.73
PSEN1-213ENST00000555386 NIF3L1Q9GZT8 377 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 INTS2Q9H0H0 1204 aaKnown RBP10.49□□□□□ -0.73
PSEN1-213ENST00000555386 NUCKS1Q9H1E3 243 aaKnown RBP10.49□□□□□ -0.73
PSEN1-213ENST00000555386 DPEP3Q9H4B8 488 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 CYP4F11Q9HBI6 524 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 ABI2Q9NYB9 513 aaPredicted RBP10.49□□□□□ -0.73
PSEN1-213ENST00000555386 GCNT4Q9P109 453 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 SIK3Q9Y2K2 1263 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 SLC27A5Q9Y2P5 690 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 REXO2Q9Y3B8 237 aaKnown RBP10.49□□□□□ -0.73
PSEN1-213ENST00000555386 CCL16O15467 120 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 NCK2O43639 380 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 SOAT2O75908 522 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 SEC24AO95486 1093 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 SLC9A1P19634 815 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 WARSP23381 471 aaKnown RBP10.49□□□□□ -0.73
PSEN1-213ENST00000555386 LTBRP36941 435 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 ASPAP45381 313 aa10.49□□□□□ -0.73
PSEN1-213ENST00000555386 LHX1P48742 406 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms