RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 FUKQ8N0W3 1084 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 C12orf29Q8N999 325 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 ANP32BQ92688 251 aaKnown RBP17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 CEP295NLQ96MC4 621 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 FAM161BQ96MY7 647 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 TMLHEQ9NVH6 421 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 IMPACTQ9P2X3 320 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 FBXW11Q9UKB1 542 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 O00370 1275 aa17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 GFPT2O94808 682 aa17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 HNRNPH3P31942 346 aaKnown RBP17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 KRT9P35527 623 aa17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 PDE6CP51160 858 aa17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 CYP27A1Q02318 531 aa17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 ADCY1Q08828 1119 aa17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 KCNC3Q14003 757 aa17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 TCEAL5Q5H9L2 206 aa17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 SFMBT2Q5VUG0 894 aa17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 TMEM184AQ6ZMB5 413 aa17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 CCDC149Q6ZUS6 474 aa17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 EFHBQ8N7U6 833 aa17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 OR8K1Q8NGG5 319 aa17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 CPLX3Q8WVH0 158 aa17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 SMARCD1Q96GM5 515 aa17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 CDX2Q99626 313 aaPredicted RBP17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 B3GNT5Q9BYG0 378 aa17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 ABI2Q9NYB9 513 aaPredicted RBP17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 HCFC2Q9Y5Z7 792 aa17.45■□□□□ 0.38
SPTLC2-203ENST00000554901 MFAP3LO75121 409 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 PNMA6AP0CW24 399 aaPredicted RBP17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 SRGAP2BP0DMP2 458 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 CYP11B1P15538 503 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 IGFBP4P22692 258 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 PRKCIP41743 596 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 PPP1R26Q5T8A7 1209 aaPredicted RBP17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 LCLAT1Q6UWP7 414 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 IRF2BP2Q7Z5L9 587 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 RBM23Q86U06 439 aaKnown RBP17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 FAM35AQ86V20 835 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 SLC47A2Q86VL8 602 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 DRC7Q8IY82 874 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 ATAD1Q8NBU5 361 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 KREMEN2Q8NCW0 462 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 SLC2A14Q8TDB8 520 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 EPS8L1Q8TE68 723 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 ZNF606Q8WXB4 792 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 CASP10Q92851 521 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 DNAJC7Q99615 494 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 MED10Q9BTT4 135 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 FAM49BQ9NUQ9 324 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 MTMR10Q9NXD2 777 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 HESX1Q9UBX0 185 aa17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 BZW2Q9Y6E2 419 aaKnown RBP17.44■□□□□ 0.38
SPTLC2-203ENST00000554901 CDH23Q9H251 3354 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 ATG2AQ2TAZ0 1938 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 GOLGA6L6A8MZA4 724 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 AKR1B15C9JRZ8 316 aaPredicted RBP17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 PER2O15055 1255 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 THAP12O43422 761 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 VNN2O95498 520 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 HAPLN1P10915 354 aaPredicted RBP17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 CCDC130P13994 396 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 HOXA9P31269 272 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 SLC8A3P57103 927 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 HYAL1Q12794 435 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 PLD1Q13393 1074 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 ASIC2Q16515 512 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 TSR1Q2NL82 804 aaKnown RBP17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 LIN9Q5TKA1 542 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 PAQR9Q6ZVX9 377 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 Q7L0L9 218 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 ANKRD52Q8NB46 1076 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 TFAP2BQ92481 460 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 PGLYRP2Q96PD5 576 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 CYP4F11Q9HBI6 524 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 CSNK1G1Q9HCP0 422 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 DZANK1Q9NVP4 752 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 TSPAN16Q9UKR8 245 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 PCDHGC3Q9UN70 934 aa17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 PRRC2BQ5JSZ5 2229 aaKnown RBP17.43■□□□□ 0.38
SPTLC2-203ENST00000554901 PRRG1O14668 218 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 TRIM66O15016 1216 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 FAM200BP0CF97 657 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 BRD2P25440 801 aaKnown RBP17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 BCAT1P54687 386 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 RPL10AP62906 217 aaKnown RBP17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 DUSP4Q13115 394 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 COL19A1Q14993 1142 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 CCDC142Q17RM4 750 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 GUCD1Q96NT3 240 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 LPIN3Q9BQK8 851 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 ZNF518BQ9C0D4 1074 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 PNPLA8Q9NP80 782 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 DMAP1Q9NPF5 467 aaPredicted RBP17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 NOCTQ9UK39 431 aaKnown RBP17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 PAPLNO95428 1278 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 SEC24AO95486 1093 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 POU2F2P09086 479 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 SETSIPP0DME0 302 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms