RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 PCSK6P29122 969 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 AQP4P55087 323 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 OVGP1Q12889 678 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 BCL2A1Q16548 175 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 THOC7Q6I9Y2 204 aaKnown RBP16.41■□□□□ 0.22
SYNE3-203ENST00000554873 LVRNQ6Q4G3 990 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 ULK2Q8IYT8 1036 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 METTL25Q8N6Q8 603 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 GMCL1P1Q8NEA9 526 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 VPS50Q96JG6 964 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 NACA2Q9H009 215 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 KIAA1586Q9HCI6 787 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 ARHGEF4Q9NR80 690 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 KCNQ5Q9NR82 932 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 PLK2Q9NYY3 685 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 THEGQ9P2T0 379 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 FAM198AQ9UFP1 575 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 ANAPC5Q9UJX4 755 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 HEY1Q9Y5J3 304 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 UBE4BO95155 1302 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 LTBP1Q14766 1721 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 SORBS3O60504 671 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 BMP3P12645 472 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 ADRA2BP18089 450 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 KRT15P19012 456 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 IVDP26440 423 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 ERFP50548 548 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 JAG1P78504 1218 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 TCEAL1Q15170 157 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 TMEM179Q6ZVK1 233 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 SYDE1Q6ZW31 735 aaPredicted RBP16.4■□□□□ 0.22
SYNE3-203ENST00000554873 STXBP4Q6ZWJ1 553 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 TDRPQ86YL5 185 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 CPNE8Q86YQ8 564 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 RELL1Q8IUW5 271 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 C4orf33Q8N1A6 199 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 PCDHB18PQ96TA0 734 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 EIF2AQ9BY44 585 aaKnown RBP16.4■□□□□ 0.22
SYNE3-203ENST00000554873 S100A14Q9HCY8 104 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 CROTQ9UKG9 612 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 EMSYQ7Z589 1322 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 EXOC1LA0A1B0GW35 172 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 KLRG2A4D1S0 409 aaPredicted RBP16.4■□□□□ 0.22
SYNE3-203ENST00000554873 PIK3CDO00329 1044 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 TYROBPO43914 113 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 SLC5A2P31639 672 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 MYLK3Q32MK0 819 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 BORAQ6PGQ7 559 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 TRIM50Q86XT4 487 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 SLC9A9Q8IVB4 645 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 MTBPQ96DY7 904 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 BTBD9Q96Q07 612 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 NACC1Q96RE7 527 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 MRPS26Q9BYN8 205 aaKnown RBP16.4■□□□□ 0.22
SYNE3-203ENST00000554873 WNT8AQ9H1J5 351 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 PCIF1Q9H4Z3 704 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 KIAA1522Q9P206 1035 aaPredicted RBP16.4■□□□□ 0.22
SYNE3-203ENST00000554873 SLC7A8Q9UHI5 535 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 ZNHIT2Q9UHR6 403 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 NR2E3Q9Y5X4 410 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 MYH11P35749 1972 aa16.4■□□□□ 0.22
SYNE3-203ENST00000554873 LSM1O15116 133 aaKnown RBP16.39■□□□□ 0.21
SYNE3-203ENST00000554873 PIK3CAP42336 1068 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 PRELPP51888 382 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 UBXN2AP68543 259 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 PPP3CAQ08209 521 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 PTK6Q13882 451 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 PKN2Q16513 984 aaKnown RBP16.39■□□□□ 0.21
SYNE3-203ENST00000554873 LRRC36Q1X8D7 754 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 ZNF362Q5T0B9 420 aaPredicted RBP16.39■□□□□ 0.21
SYNE3-203ENST00000554873 SLC5A5Q92911 643 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 ZDHHC15Q96MV8 337 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 STRA6Q9BX79 667 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 PLA2G4CQ9UP65 541 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 QSER1Q2KHR3 1735 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 TISP43B9A030 160 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 H3BRJ5 948 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 TXNDC9O14530 226 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 CFBP00751 764 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 ATF2P15336 505 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 RFX1P22670 979 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 RAB15P59190 212 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 ABCB5Q2M3G0 1257 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 PACS1Q6VY07 963 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 KAT5Q92993 513 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 C9orf72Q96LT7 481 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 TMEM120AQ9BXJ8 343 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 C17orf75Q9HAS0 396 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 PRR12Q9ULL5 1215 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 SIPA1L1O43166 1804 aa16.39■□□□□ 0.21
SYNE3-203ENST00000554873 FCHO1O14526 889 aa16.38■□□□□ 0.21
SYNE3-203ENST00000554873 ATMINO43313 823 aaPredicted RBP16.38■□□□□ 0.21
SYNE3-203ENST00000554873 DKC1O60832 514 aaKnown RBP eCLIP16.38■□□□□ 0.21
SYNE3-203ENST00000554873 COL6A2P12110 1019 aa16.38■□□□□ 0.21
SYNE3-203ENST00000554873 GCAP28676 217 aa16.38■□□□□ 0.21
SYNE3-203ENST00000554873 CPA2P48052 419 aa16.38■□□□□ 0.21
SYNE3-203ENST00000554873 ITGA7Q13683 1181 aa16.38■□□□□ 0.21
SYNE3-203ENST00000554873 DNAL1Q4LDG9 190 aa16.38■□□□□ 0.21
SYNE3-203ENST00000554873 DAW1Q8N136 415 aa16.38■□□□□ 0.21
SYNE3-203ENST00000554873 CD101Q93033 1021 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms