RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 CFAP45Q9UL16 551 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 KIF24Q5T7B8 1368 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 SNED1Q8TER0 1413 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 SLC12A8A0AV02 714 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 FAM221BA6H8Z2 402 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 C2orf78A6NCI8 922 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 FZD9O00144 591 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 ATP8B1O43520 1251 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 SGTAO43765 313 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 MAFO75444 373 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-227ENST00000554491 STAM2O75886 525 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 PYGLP06737 847 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 VIL1P09327 827 aaKnown RBP4.86□□□□□ -1.63
ATXN3-227ENST00000554491 CCNHP51946 323 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-227ENST00000554491 HDAC4P56524 1084 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 TBX4P57082 545 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 ANTXR2P58335 489 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 ADAM8P78325 824 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 ALDH6A1Q02252 535 aaKnown RBP4.86□□□□□ -1.63
ATXN3-227ENST00000554491 ADCY1Q08828 1119 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 MAP3K12Q12852 859 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 ZBTB17Q13105 803 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 PABPC4Q13310 644 aaKnown RBP eCLIP4.86□□□□□ -1.63
ATXN3-227ENST00000554491 LAMB3Q13751 1172 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 SEPT2Q15019 361 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 SPDYCQ5MJ68 293 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 ANKRD45Q5TZF3 282 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 KLHDC10Q6PID8 442 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 CCBE1Q6UXH8 406 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-227ENST00000554491 USP50Q70EL3 339 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-227ENST00000554491 GAREM2Q75VX8 874 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 DAAM2Q86T65 1068 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 GAS2L3Q86XJ1 694 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 DZIP1Q86YF9 867 aaKnown RBP4.86□□□□□ -1.63
ATXN3-227ENST00000554491 WDR63Q8IWG1 891 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 ULK2Q8IYT8 1036 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 ARL6IP6Q8N6S5 226 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 ANKRD53Q8N9V6 530 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 SH3TC2Q8TF17 1288 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 LRRC45Q96CN5 670 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 RUFY1Q96T51 708 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 TTPALQ9BTX7 342 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 STK31Q9BXU1 1019 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 SLC7A5P2Q9GIP4 190 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 BRD8Q9H0E9 1235 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 VCX3BQ9H321 246 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 BATF3Q9NR55 127 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 ZNF277Q9NRM2 450 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-227ENST00000554491 RNF186Q9NXI6 227 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 SEPT10Q9P0V9 454 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 XPO7Q9UIA9 1087 aaKnown RBP4.86□□□□□ -1.63
ATXN3-227ENST00000554491 MYO6Q9UM54 1294 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 VWA7Q9Y334 891 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 RBM8AQ9Y5S9 174 aaKnown RBP4.86□□□□□ -1.63
ATXN3-227ENST00000554491 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.86□□□□□ -1.63
ATXN3-227ENST00000554491 HTTP42858 3142 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 KDM3BQ7LBC6 1761 aa4.86□□□□□ -1.63
ATXN3-227ENST00000554491 A0A0C4DFX4 3053 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 GOLGA6L10A0A0M3HER8 536 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 TCRBV16S1A1N1A0A5B0 115 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 GOLGA8AA7E2F4 631 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 EIF3CLB5ME19 914 aaKnown RBP4.85□□□□□ -1.63
ATXN3-227ENST00000554491 EIF3FO00303 357 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-227ENST00000554491 AHCYL1O43865 530 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 PLIN1O60240 522 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 RAMP2O60895 175 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 EFCAB14O75071 495 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 HNRNPCP07910 306 aaKnown RBP eCLIP4.85□□□□□ -1.63
ATXN3-227ENST00000554491 ZBTB48P10074 688 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-227ENST00000554491 PAPOLAP51003 745 aaKnown RBP4.85□□□□□ -1.63
ATXN3-227ENST00000554491 HUNKP57058 714 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 SLC8A3P57103 927 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 IRF9Q00978 393 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 COL10A1Q03692 680 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 TOB2Q14106 344 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-227ENST00000554491 MYBPC3Q14896 1274 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 RCN1Q15293 331 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 LONRF2Q1L5Z9 754 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 TMEM177Q53S58 311 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 TRIM61Q5EBN2 209 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 CAVIN1Q6NZI2 390 aaKnown RBP4.85□□□□□ -1.63
ATXN3-227ENST00000554491 FBXO46Q6PJ61 603 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-227ENST00000554491 FGD2Q7Z6J4 655 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 NOP9Q86U38 636 aaKnown RBP4.85□□□□□ -1.63
ATXN3-227ENST00000554491 BRSK2Q8IWQ3 736 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 RNF168Q8IYW5 571 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-227ENST00000554491 ANKRD35Q8N283 1001 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 GBP7Q8N8V2 638 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-227ENST00000554491 IGSF22Q8N9C0 903 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 CCDC150Q8NCX0 1101 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 B4GALNT2Q8NHY0 566 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 ATRIPQ8WXE1 791 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 ARHGAP45Q92619 1136 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 USP6NLQ92738 828 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 SLC7A6OSQ96CW6 309 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-227ENST00000554491 TESK2Q96S53 571 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 EIF3CQ99613 913 aaKnown RBP4.85□□□□□ -1.63
ATXN3-227ENST00000554491 FOXB1Q99853 325 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 TCHPQ9BT92 498 aa4.85□□□□□ -1.63
ATXN3-227ENST00000554491 BRIP1Q9BX63 1249 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms