RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 OR56A3Q8NH54 315 aa6.2□□□□□ -1.42
SCFD1-211ENST00000554437 MYCBPAPQ8TBZ2 947 aa6.2□□□□□ -1.42
SCFD1-211ENST00000554437 PHKBQ93100 1093 aa6.2□□□□□ -1.42
SCFD1-211ENST00000554437 FAM136AQ96C01 138 aa6.2□□□□□ -1.42
SCFD1-211ENST00000554437 MESP1Q9BRJ9 268 aa6.2□□□□□ -1.42
SCFD1-211ENST00000554437 PTDSS2Q9BVG9 487 aa6.2□□□□□ -1.42
SCFD1-211ENST00000554437 STK31Q9BXU1 1019 aa6.2□□□□□ -1.42
SCFD1-211ENST00000554437 COL20A1Q9P218 1284 aa6.2□□□□□ -1.42
SCFD1-211ENST00000554437 CORO2BQ9UQ03 480 aa6.2□□□□□ -1.42
SCFD1-211ENST00000554437 PYCARD-AS1I3L0S3 204 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 PMM2O15305 246 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 PROM1O43490 865 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 RASSF9O75901 435 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 ESRRBO95718 433 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 SLPIP03973 132 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 PHKG2P15735 406 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 LRPAP1P30533 357 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 MPLP40238 635 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 FOLR3P41439 243 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 INHBCP55103 352 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 NXPH1P58417 271 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 TGFB2P61812 414 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 DPTQ07507 201 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 FOXI1Q12951 378 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 MGAT5BQ3V5L5 792 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 PLA1AQ53H76 456 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 ARHGAP40Q5TG30 622 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 ICE2Q659A1 982 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 CCSAPQ6IQ19 270 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-211ENST00000554437 ZNF280BQ86YH2 543 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 PGBD1Q96JS3 809 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 ARNT2Q9HBZ2 717 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 LRIT1Q9P2V4 623 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 PACSIN3Q9UKS6 424 aa6.19□□□□□ -1.42
SCFD1-211ENST00000554437 MBD3L4A6NDZ8 208 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-211ENST00000554437 MBD3L3A6NE82 208 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-211ENST00000554437 hCG_1984214I3L0E3 225 aa6.18□□□□□ -1.42
SCFD1-211ENST00000554437 CHRM2P08172 466 aa6.18□□□□□ -1.42
SCFD1-211ENST00000554437 MRPS35P82673 323 aaKnown RBP6.18□□□□□ -1.42
SCFD1-211ENST00000554437 E2F2Q14209 437 aa6.18□□□□□ -1.42
SCFD1-211ENST00000554437 RGS7BPQ6MZT1 257 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-211ENST00000554437 GAS2L3Q86XJ1 694 aa6.18□□□□□ -1.42
SCFD1-211ENST00000554437 FAM109AQ8N4B1 249 aa6.18□□□□□ -1.42
SCFD1-211ENST00000554437 SPSB4Q96A44 273 aa6.18□□□□□ -1.42
SCFD1-211ENST00000554437 TOR3AQ9H497 397 aa6.18□□□□□ -1.42
SCFD1-211ENST00000554437 SERTAD3Q9UJW9 196 aa6.18□□□□□ -1.42
SCFD1-211ENST00000554437 NDRG4Q9ULP0 352 aaKnown RBP6.18□□□□□ -1.42
SCFD1-211ENST00000554437 TBC1D30Q9Y2I9 924 aa6.18□□□□□ -1.42
SCFD1-211ENST00000554437 MRPS17Q9Y2R5 130 aaKnown RBP6.18□□□□□ -1.42
SCFD1-211ENST00000554437 A0A087X1B8 175 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 FOXN3O00409 490 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-211ENST00000554437 PPM1DO15297 605 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 MPPED1O15442 326 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 RHOBTB3O94955 611 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 RHOP08100 348 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 MYL3P08590 195 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 SLC5A1P13866 664 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 KLRC1P26715 233 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 PPIFP30405 207 aaKnown RBP6.17□□□□□ -1.42
SCFD1-211ENST00000554437 ADRA1BP35368 520 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 PLA2G5P39877 138 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 PIK3CBP42338 1070 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 MYO1EQ12965 1108 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 KAZNQ674X7 775 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 ZDHHC24Q6UX98 284 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 ACTRT2Q8TDY3 377 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 TFAP2BQ92481 460 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 MSLNLQ96KJ4 702 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 SORCS2Q96PQ0 1159 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 PPP1R9BQ96SB3 815 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 STRBPQ96SI9 672 aaKnown RBP6.17□□□□□ -1.42
SCFD1-211ENST00000554437 TBCBQ99426 244 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 UNKQ9C0B0 810 aaKnown RBP6.17□□□□□ -1.42
SCFD1-211ENST00000554437 PNPLA8Q9NP80 782 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 ITGB1BP2Q9UKP3 347 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 HDAC9Q9UKV0 1011 aa6.17□□□□□ -1.42
SCFD1-211ENST00000554437 ANO9A1A5B4 782 aa6.16□□□□□ -1.42
SCFD1-211ENST00000554437 F8W8V4 182 aa6.16□□□□□ -1.42
SCFD1-211ENST00000554437 KPNA5O15131 536 aa6.16□□□□□ -1.42
SCFD1-211ENST00000554437 PDHA1P08559 390 aa6.16□□□□□ -1.42
SCFD1-211ENST00000554437 PRKAG1P54619 331 aa6.16□□□□□ -1.42
SCFD1-211ENST00000554437 EIF2B5Q13144 721 aaKnown RBP6.16□□□□□ -1.42
SCFD1-211ENST00000554437 IFIT5Q13325 482 aaKnown RBP6.16□□□□□ -1.42
SCFD1-211ENST00000554437 PICALMQ13492 652 aa6.16□□□□□ -1.42
SCFD1-211ENST00000554437 PTPRRQ15256 657 aa6.16□□□□□ -1.42
SCFD1-211ENST00000554437 ZIK1Q3SY52 487 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-211ENST00000554437 MAP9Q49MG5 647 aa6.16□□□□□ -1.42
SCFD1-211ENST00000554437 C11orf96Q7Z7L8 435 aa6.16□□□□□ -1.42
SCFD1-211ENST00000554437 CCDC146Q8IYE0 955 aa6.16□□□□□ -1.42
SCFD1-211ENST00000554437 FKBP10Q96AY3 582 aa6.16□□□□□ -1.42
SCFD1-211ENST00000554437 MRIQ9BWK5 157 aa6.16□□□□□ -1.42
SCFD1-211ENST00000554437 NAA15Q9BXJ9 866 aaKnown RBP6.16□□□□□ -1.42
SCFD1-211ENST00000554437 CXorf36Q9H7Y0 433 aa6.16□□□□□ -1.42
SCFD1-211ENST00000554437 KLC4Q9NSK0 619 aa6.16□□□□□ -1.42
SCFD1-211ENST00000554437 SSX2IPQ9Y2D8 614 aa6.16□□□□□ -1.42
SCFD1-211ENST00000554437 ADGRA2Q96PE1 1338 aa6.16□□□□□ -1.42
SCFD1-211ENST00000554437 SALL3Q9BXA9 1300 aa6.16□□□□□ -1.42
SCFD1-211ENST00000554437 LOC102723971A0A1B0GUV8 181 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 IL18RAPO95256 599 aa6.15□□□□□ -1.42
SCFD1-211ENST00000554437 DGKEP52429 567 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms