RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 HSPBP1Q9NZL4 362 aa20.12■□□□□ 0.81
CPSF2-203ENST00000554290 NUP210Q8TEM1 1887 aaPredicted RBP20.11■□□□□ 0.81
CPSF2-203ENST00000554290 FRYLO94915 3013 aa20.11■□□□□ 0.81
CPSF2-203ENST00000554290 NOL4O94818 638 aa20.11■□□□□ 0.81
CPSF2-203ENST00000554290 AMPD2Q01433 879 aa20.11■□□□□ 0.81
CPSF2-203ENST00000554290 RUNX3Q13761 415 aa20.11■□□□□ 0.81
CPSF2-203ENST00000554290 CCINQ13939 588 aa20.11■□□□□ 0.81
CPSF2-203ENST00000554290 FAM26FQ5R3K3 315 aa20.11■□□□□ 0.81
CPSF2-203ENST00000554290 C4orf50Q6ZRC1 276 aa20.11■□□□□ 0.81
CPSF2-203ENST00000554290 OSTM1Q86WC4 334 aa20.11■□□□□ 0.81
CPSF2-203ENST00000554290 WDR49Q8IV35 697 aa20.11■□□□□ 0.81
CPSF2-203ENST00000554290 OR5B17Q8NGF7 314 aa20.11■□□□□ 0.81
CPSF2-203ENST00000554290 ZNF507Q8TCN5 953 aa20.11■□□□□ 0.81
CPSF2-203ENST00000554290 MYRFLQ96LU7 910 aa20.11■□□□□ 0.81
CPSF2-203ENST00000554290 MAGEF1Q9HAY2 307 aa20.11■□□□□ 0.81
CPSF2-203ENST00000554290 DLL3Q9NYJ7 618 aa20.11■□□□□ 0.81
CPSF2-203ENST00000554290 CCL26Q9Y258 94 aa20.11■□□□□ 0.81
CPSF2-203ENST00000554290 CNR2P34972 360 aa20.1■□□□□ 0.81
CPSF2-203ENST00000554290 MAGEA11P43364 429 aa20.1■□□□□ 0.81
CPSF2-203ENST00000554290 ZNF268Q14587 947 aaPredicted RBP20.1■□□□□ 0.81
CPSF2-203ENST00000554290 MAPRE1Q15691 268 aaKnown RBP20.1■□□□□ 0.81
CPSF2-203ENST00000554290 WDR44Q5JSH3 913 aa20.1■□□□□ 0.81
CPSF2-203ENST00000554290 LAIR1Q6GTX8 287 aa20.1■□□□□ 0.81
CPSF2-203ENST00000554290 Q6ZS52 159 aa20.1■□□□□ 0.81
CPSF2-203ENST00000554290 EPM2AIP1Q7L775 607 aaPredicted RBP20.1■□□□□ 0.81
CPSF2-203ENST00000554290 SCN4BQ8IWT1 228 aa20.1■□□□□ 0.81
CPSF2-203ENST00000554290 FSIP1Q8NA03 581 aa20.1■□□□□ 0.81
CPSF2-203ENST00000554290 STKLD1Q8NE28 680 aa20.1■□□□□ 0.81
CPSF2-203ENST00000554290 SNX21Q969T3 373 aa20.1■□□□□ 0.81
CPSF2-203ENST00000554290 C7orf25Q9BPX7 421 aa20.1■□□□□ 0.81
CPSF2-203ENST00000554290 SYT15Q9BQS2 421 aa20.1■□□□□ 0.81
CPSF2-203ENST00000554290 CDH9Q9ULB4 789 aa20.1■□□□□ 0.81
CPSF2-203ENST00000554290 PTPRJQ12913 1337 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 PRR5-ARHGAP8B1AHC4 643 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 CHURC1-FNTBB4DL54 471 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 HSP90AA1P07900 732 aaKnown RBP20.09■□□□□ 0.81
CPSF2-203ENST00000554290 USP17L7P0C7H9 530 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 HOXD13P35453 343 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 FNTBP49356 437 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 SNRPFP62306 86 aaKnown RBP20.09■□□□□ 0.81
CPSF2-203ENST00000554290 ARHGAP8P85298 464 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 LMNB2Q03252 620 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 GRSF1Q12849 480 aaKnown RBP eCLIP20.09■□□□□ 0.81
CPSF2-203ENST00000554290 PDGFRLQ15198 375 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 SNRNP35Q16560 246 aaKnown RBP20.09■□□□□ 0.81
CPSF2-203ENST00000554290 RSPO4Q2I0M5 234 aaPredicted RBP20.09■□□□□ 0.81
CPSF2-203ENST00000554290 FAM171BQ6P995 826 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 SHC4Q6S5L8 630 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 PRR23BQ6ZRT6 265 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 LIMS2Q7Z4I7 341 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 LONP2Q86WA8 852 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 RDH13Q8NBN7 331 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 EXOC4Q96A65 974 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 FNBP1Q96RU3 617 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 MMS19Q96T76 1030 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 EBF3Q9H4W6 596 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 AGPAT3Q9NRZ7 376 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 MAGEC2Q9UBF1 373 aaPredicted RBP20.09■□□□□ 0.81
CPSF2-203ENST00000554290 USP18Q9UMW8 372 aa20.09■□□□□ 0.81
CPSF2-203ENST00000554290 K7ESF4 209 aa20.08■□□□□ 0.81
CPSF2-203ENST00000554290 HCRTO43612 131 aa20.08■□□□□ 0.81
CPSF2-203ENST00000554290 TNNI1P19237 187 aa20.08■□□□□ 0.81
CPSF2-203ENST00000554290 HOXA6P31267 233 aa20.08■□□□□ 0.81
CPSF2-203ENST00000554290 FAM160A1Q05DH4 1040 aa20.08■□□□□ 0.81
CPSF2-203ENST00000554290 SIM2Q14190 667 aaPredicted RBP20.08■□□□□ 0.81
CPSF2-203ENST00000554290 LPAL2Q16609 132 aa20.08■□□□□ 0.81
CPSF2-203ENST00000554290 FOXD4L5Q5VV16 416 aaPredicted RBP20.08■□□□□ 0.81
CPSF2-203ENST00000554290 VSTM1Q6UX27 236 aa20.08■□□□□ 0.81
CPSF2-203ENST00000554290 UNC13DQ70J99 1090 aa20.08■□□□□ 0.81
CPSF2-203ENST00000554290 HS2ST1Q7LGA3 356 aa20.08■□□□□ 0.81
CPSF2-203ENST00000554290 TRAPPC11Q7Z392 1133 aa20.08■□□□□ 0.81
CPSF2-203ENST00000554290 KBTBD7Q8WVZ9 684 aa20.08■□□□□ 0.81
CPSF2-203ENST00000554290 FOXD4L4Q8WXT5 416 aaPredicted RBP20.08■□□□□ 0.81
CPSF2-203ENST00000554290 CEP295NLQ96MC4 621 aa20.08■□□□□ 0.81
CPSF2-203ENST00000554290 TRPC7Q9HCX4 862 aa20.08■□□□□ 0.81
CPSF2-203ENST00000554290 HPS4Q9NQG7 708 aa20.08■□□□□ 0.81
CPSF2-203ENST00000554290 FAM13BQ9NYF5 915 aa20.08■□□□□ 0.81
CPSF2-203ENST00000554290 GPR179Q6PRD1 2367 aa20.08■□□□□ 0.8
CPSF2-203ENST00000554290 UBE4BO95155 1302 aa20.07■□□□□ 0.8
CPSF2-203ENST00000554290 TRAV19A0A0A6YYK7 116 aa20.07■□□□□ 0.8
CPSF2-203ENST00000554290 TRDMT1O14717 391 aaKnown RBP20.07■□□□□ 0.8
CPSF2-203ENST00000554290 POLR2DO15514 142 aaKnown RBP20.07■□□□□ 0.8
CPSF2-203ENST00000554290 TGFB1I1O43294 461 aa20.07■□□□□ 0.8
CPSF2-203ENST00000554290 ATG13O75143 517 aa20.07■□□□□ 0.8
CPSF2-203ENST00000554290 ATP2C2O75185 946 aa20.07■□□□□ 0.8
CPSF2-203ENST00000554290 CKMP06732 381 aa20.07■□□□□ 0.8
CPSF2-203ENST00000554290 PDGFRBP09619 1106 aa20.07■□□□□ 0.8
CPSF2-203ENST00000554290 ZSCAN22P10073 491 aaPredicted RBP20.07■□□□□ 0.8
CPSF2-203ENST00000554290 DLATP10515 647 aaKnown RBP20.07■□□□□ 0.8
CPSF2-203ENST00000554290 WARSP23381 471 aaKnown RBP20.07■□□□□ 0.8
CPSF2-203ENST00000554290 LMO2P25791 158 aa20.07■□□□□ 0.8
CPSF2-203ENST00000554290 CCDC142Q17RM4 750 aa20.07■□□□□ 0.8
CPSF2-203ENST00000554290 TMEM196Q5HYL7 178 aa20.07■□□□□ 0.8
CPSF2-203ENST00000554290 HEATR6Q6AI08 1181 aaKnown RBP20.07■□□□□ 0.8
CPSF2-203ENST00000554290 TRIM68Q6AZZ1 485 aa20.07■□□□□ 0.8
CPSF2-203ENST00000554290 XXYLT1Q8NBI6 393 aa20.07■□□□□ 0.8
CPSF2-203ENST00000554290 SNX25Q9H3E2 840 aa20.07■□□□□ 0.8
CPSF2-203ENST00000554290 CGNQ9P2M7 1197 aaKnown RBP20.07■□□□□ 0.8
CPSF2-203ENST00000554290 HRO43593 1189 aa20.06■□□□□ 0.8
CPSF2-203ENST00000554290 TADA3O75528 432 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms