RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 CCDC77Q9BR77 488 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.99□□□□□ -0.81
SIX4-202ENST00000554079 OLFML3Q9NRN5 406 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 AASDHPPTQ9NRN7 309 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 RABGEF1Q9UJ41 708 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 AJAP1Q9UKB5 411 aaPredicted RBP9.99□□□□□ -0.81
SIX4-202ENST00000554079 ERGIC3Q9Y282 383 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 PCDHGA3Q9Y5H0 932 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 SQORQ9Y6N5 450 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 CROCCQ5TZA2 2017 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 A0A087WZG4 1122 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 ARHGAP33O14559 1287 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 GNPATO15228 680 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 SORBS3O60504 671 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 STAM2O75886 525 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 ABCB1P08183 1280 aaPredicted RBP9.99□□□□□ -0.81
SIX4-202ENST00000554079 POLR2MP0CAP2 368 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 GYS1P13807 737 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 ADRA1DP25100 572 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 ITGA8P53708 1063 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 JAM2P57087 298 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 KRT17Q04695 432 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 OASLQ15646 514 aaKnown RBP9.99□□□□□ -0.81
SIX4-202ENST00000554079 TMTC4Q5T4D3 741 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 CCDC81Q6ZN84 652 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 MFSD6Q6ZSS7 791 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 TICAM1Q8IUC6 712 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 IFNL3Q8IZI9 196 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 SLC38A6Q8IZM9 456 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 CACTIN-AS1Q8N1I8 211 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 SLC26A7Q8TE54 656 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 TAMM41Q96BW9 452 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 SNF8Q96H20 258 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 CCDC138Q96M89 665 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 FBXL18Q96ME1 805 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 ZNF641Q96N77 438 aaPredicted RBP9.99□□□□□ -0.81
SIX4-202ENST00000554079 CSRNP1Q96S65 589 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 HAUS8Q9BT25 410 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 TSSK1BQ9BXA7 367 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 SNX25Q9H3E2 840 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 PARVGQ9HBI0 331 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 SSU72Q9NP77 194 aaKnown RBP9.99□□□□□ -0.81
SIX4-202ENST00000554079 EBF1Q9UH73 591 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 DUOX1Q9NRD9 1551 aa9.99□□□□□ -0.81
SIX4-202ENST00000554079 TAF1LQ8IZX4 1826 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 PVALEFA0A1B0GWK0 134 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 TCRBV5S4A2TA0A5A2 114 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 MYMKA6NI61 221 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 GOLGA8CPA6NN73 597 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 TMX2-CTNND1H3BSU7 103 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 ZNF701M0R085 212 aaPredicted RBP9.98□□□□□ -0.81
SIX4-202ENST00000554079 UGT1A9O60656 530 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 LDHBP07195 334 aaKnown RBP9.98□□□□□ -0.81
SIX4-202ENST00000554079 C8BP07358 591 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 UCHL3P15374 230 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 TATP17735 454 aaPredicted RBP9.98□□□□□ -0.81
SIX4-202ENST00000554079 UGT1A6P19224 532 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 UGT1A1P22309 533 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 UGT1A4P22310 534 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 UGT1A3P35503 534 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 UGT1A5P35504 534 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 SCNN1DP51172 638 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 UBE3CQ15386 1083 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 RGS21Q2M5E4 152 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 PPP1R2P3Q6NXS1 205 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 COPS6Q7L5N1 327 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 LRP10Q7Z4F1 713 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 CATIPQ7Z7H3 387 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 OSTM1Q86WC4 334 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 CADM3Q8N126 398 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 TSPAN14Q8NG11 270 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 SUN5Q8TC36 379 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 CALML6Q8TD86 181 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 HELQQ8TDG4 1101 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 MORC4Q8TE76 937 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 ISOC1Q96CN7 298 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 ZNF594Q96JF6 807 aaPredicted RBP9.98□□□□□ -0.81
SIX4-202ENST00000554079 CEP63Q96MT8 703 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 ZSWIM1Q9BR11 485 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 TDRD1Q9BXT4 1180 aaKnown RBP9.98□□□□□ -0.81
SIX4-202ENST00000554079 RNF41Q9H4P4 317 aaPredicted RBP9.98□□□□□ -0.81
SIX4-202ENST00000554079 LRRC19Q9H756 370 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 KANSL2Q9H9L4 492 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 UGT1A7Q9HAW7 530 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 UGT1A10Q9HAW8 530 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 UGT1A8Q9HAW9 530 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 POLIQ9UNA4 740 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 COG5Q9UP83 839 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 B3GNT3Q9Y2A9 372 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 SLC30A1Q9Y6M5 507 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 ROBO2Q9HCK4 1378 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 ARAP2Q8WZ64 1704 aa9.98□□□□□ -0.81
SIX4-202ENST00000554079 A0A1W2PPM1 405 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 A6NL46 340 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 MIF4GDA9UHW6 222 aaKnown RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 PSMD12O00232 456 aaPredicted RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 CDK2AP1O14519 115 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 CLOCKO15516 846 aa9.97□□□□□ -0.81
SIX4-202ENST00000554079 RNMTO43148 476 aaKnown RBP9.97□□□□□ -0.81
SIX4-202ENST00000554079 TBCAO75347 108 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms