RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 ZSCAN16Q9H4T2 348 aaPredicted RBP9.51□□□□□ -0.89
TDP1-208ENST00000553989 EBF3Q9H4W6 596 aa9.51□□□□□ -0.89
TDP1-208ENST00000553989 TRPC7Q9HCX4 862 aa9.51□□□□□ -0.89
TDP1-208ENST00000553989 GKN1Q9NS71 199 aa9.51□□□□□ -0.89
TDP1-208ENST00000553989 C2orf42Q9NWW7 574 aa9.51□□□□□ -0.89
TDP1-208ENST00000553989 ZMYM5Q9UJ78 669 aa9.51□□□□□ -0.89
TDP1-208ENST00000553989 PCDHB5Q9Y5E4 795 aa9.51□□□□□ -0.89
TDP1-208ENST00000553989 NUP210Q8TEM1 1887 aaPredicted RBP9.51□□□□□ -0.89
TDP1-208ENST00000553989 TSC2P49815 1807 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 FRYLO94915 3013 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 ANO9A1A5B4 782 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 GOLGA6L4A6NEF3 574 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 GOLGA6L6A8MZA4 724 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 KPNA7A9QM74 516 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 ANKRD63C9JTQ0 380 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 EXTL3O43909 919 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 GADD45BO75293 160 aaPredicted RBP9.5□□□□□ -0.89
TDP1-208ENST00000553989 GABBR2O75899 941 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 IL18RAPO95256 599 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 ADRB2P07550 413 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 HAPLN1P10915 354 aaPredicted RBP9.5□□□□□ -0.89
TDP1-208ENST00000553989 DDX6P26196 483 aaKnown RBP eCLIP9.5□□□□□ -0.89
TDP1-208ENST00000553989 LONP1P36776 959 aaKnown RBP9.5□□□□□ -0.89
TDP1-208ENST00000553989 PNPLA4P41247 253 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 GTF2BQ00403 316 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 PSMD2Q13200 908 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 RUNX3Q13761 415 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 CCDC6Q16204 474 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 WDR44Q5JSH3 913 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 TXNDC8Q6A555 127 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 DYMQ7RTS9 669 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 CACNA2D4Q7Z3S7 1137 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 MTERF4Q7Z6M4 381 aaKnown RBP9.5□□□□□ -0.89
TDP1-208ENST00000553989 SFR1Q86XK3 245 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 STKLD1Q8NE28 680 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 GAB3Q8WWW8 586 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 DDX1Q92499 740 aaKnown RBP9.5□□□□□ -0.89
TDP1-208ENST00000553989 KCNN1Q92952 543 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 EXOC4Q96A65 974 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 PI4K2AQ9BTU6 479 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 ARRDC1-AS1Q9H2J1 176 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 MRPL44Q9H9J2 332 aaKnown RBP9.5□□□□□ -0.89
TDP1-208ENST00000553989 KIF9Q9HAQ2 790 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 IL21Q9HBE4 155 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 BLOC1S4Q9NUP1 217 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 USP25Q9UHP3 1055 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 CFAP45Q9UL16 551 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 EXOC7Q9UPT5 735 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 CCL26Q9Y258 94 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 R3HCC1Q9Y3T6 440 aaKnown RBP9.5□□□□□ -0.89
TDP1-208ENST00000553989 WDR87Q6ZQQ6 2873 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 SPTBN2O15020 2390 aa9.5□□□□□ -0.89
TDP1-208ENST00000553989 HUS1O60921 280 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 RNF40O75150 1001 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 KRT37O76014 449 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 KRT19P08727 400 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 CSH1P0DML2 217 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 CSH2P0DML3 217 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 WEE1P30291 646 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 POLR2BP30876 1174 aaKnown RBP9.49□□□□□ -0.89
TDP1-208ENST00000553989 HOXC13P31276 330 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 TXLNAP40222 546 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 GPR15P49685 360 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 NLRP12P59046 1061 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 MYL7Q01449 175 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 GRIN1Q05586 938 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 POSTNQ15063 836 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 SF3A2Q15428 464 aaKnown RBP9.49□□□□□ -0.89
TDP1-208ENST00000553989 SF3A1Q15459 793 aaKnown RBP9.49□□□□□ -0.89
TDP1-208ENST00000553989 NFE2Q16621 373 aaPredicted RBP9.49□□□□□ -0.89
TDP1-208ENST00000553989 ST3GAL2Q16842 350 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 SDHAF4Q5VUM1 108 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 FSTL4Q6MZW2 842 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 PKN3Q6P5Z2 889 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 LRRTM3Q86VH5 581 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 EFCAB13Q8IY85 973 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 SYCP3Q8IZU3 236 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 LRRC15Q8TF66 581 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 USP13Q92995 863 aaPredicted RBP9.49□□□□□ -0.89
TDP1-208ENST00000553989 SAAL1Q96ER3 474 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 HHIPQ96QV1 700 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 FAM213AQ9BRX8 229 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 HPS4Q9NQG7 708 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 TDP1Q9NUW8 608 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 TBC1D7Q9P0N9 293 aa9.49□□□□□ -0.89
TDP1-208ENST00000553989 UXTQ9UBK9 157 aaPredicted RBP9.49□□□□□ -0.89
TDP1-208ENST00000553989 TCHHQ07283 1943 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 VPS37CA5D8V6 355 aaPredicted RBP9.48□□□□□ -0.89
TDP1-208ENST00000553989 GCNT3O95395 438 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 EGFP01133 1207 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 ITGB3P05106 788 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 CKMP06732 381 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 IDEP14735 1019 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 ARSAP15289 507 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 ACAT1P24752 427 aaKnown RBP9.48□□□□□ -0.89
TDP1-208ENST00000553989 HOXA6P31267 233 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 IFNAR2P48551 515 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 RPL10AP62906 217 aaKnown RBP9.48□□□□□ -0.89
TDP1-208ENST00000553989 MTF1Q14872 753 aa9.48□□□□□ -0.89
TDP1-208ENST00000553989 PDGFRLQ15198 375 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms