RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 MOGAT1Q96PD6 335 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 PABPC3Q9H361 631 aaKnown RBP4.5□□□□□ -1.69
TDP1-207ENST00000553617 TP63Q9H3D4 680 aaPredicted RBP4.5□□□□□ -1.69
TDP1-207ENST00000553617 UNC45AQ9H3U1 944 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 FAM83DQ9H4H8 585 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 SAYSD1Q9NPB0 183 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 PRDM8Q9NQV8 689 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 VPS45Q9NRW7 570 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 RASSF1Q9NS23 344 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 VSX1Q9NZR4 365 aaPredicted RBP4.5□□□□□ -1.69
TDP1-207ENST00000553617 KIF17Q9P2E2 1029 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 LPAR3Q9UBY5 353 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 FEM1BQ9UK73 627 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 OAZ3Q9UMX2 235 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 KCTD3Q9Y597 815 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 HS3ST4Q9Y661 456 aa4.5□□□□□ -1.69
TDP1-207ENST00000553617 AQP7P3A6NL99 342 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 DRGXA6NNA5 263 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 DHHO43323 396 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 RRP9O43818 475 aaKnown RBP4.49□□□□□ -1.69
TDP1-207ENST00000553617 NTSR2O95665 410 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 POLBP06746 335 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 TPH1P17752 444 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 ATICP31939 592 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 PTDSS1P48651 473 aaKnown RBP4.49□□□□□ -1.69
TDP1-207ENST00000553617 G3BP1Q13283 466 aaKnown RBP eCLIP4.49□□□□□ -1.69
TDP1-207ENST00000553617 IQCB1Q15051 598 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 METRNLQ641Q3 311 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 OGFOD2Q6N063 350 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 MFSD5Q6N075 450 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 KLHL17Q6TDP4 642 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 TMPRSS9Q7Z410 1059 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 KCTD20Q7Z5Y7 419 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 ZNF280BQ86YH2 543 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 CFAP52Q8N1V2 620 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 LINC01356Q8N9X3 169 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 RSC1A1Q92681 617 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 SLC46A1Q96NT5 459 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 RBM15Q96T37 977 aaKnown RBP eCLIP4.49□□□□□ -1.69
TDP1-207ENST00000553617 SEC62Q99442 399 aaKnown RBP4.49□□□□□ -1.69
TDP1-207ENST00000553617 DPYSL5Q9BPU6 564 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 PYM1Q9BRP8 204 aaKnown RBP4.49□□□□□ -1.69
TDP1-207ENST00000553617 SLC46A2Q9BY10 475 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 KRTAP4-9Q9BYQ8 210 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 EPC1Q9H2F5 836 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 NELFAQ9H3P2 528 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 ZBTB26Q9HCK0 441 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 CD320Q9NPF0 282 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 UBN1Q9NPG3 1134 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 IFT80Q9P2H3 777 aaPredicted RBP4.49□□□□□ -1.69
TDP1-207ENST00000553617 CNOT6Q9ULM6 557 aaKnown RBP4.49□□□□□ -1.69
TDP1-207ENST00000553617 CLCA2Q9UQC9 943 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 CDY1Q9Y6F8 540 aa4.49□□□□□ -1.69
TDP1-207ENST00000553617 PRR5-ARHGAP8B1AHC4 643 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 FCHO1O14526 889 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 HOXC11O43248 304 aaPredicted RBP4.48□□□□□ -1.69
TDP1-207ENST00000553617 B4GALT4O60513 344 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 ACTL6BO94805 426 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 CD4P01730 458 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 LDHCP07864 332 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 ATXN1LP0C7T5 689 aaKnown RBP4.48□□□□□ -1.69
TDP1-207ENST00000553617 ARP10275 920 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 GYS1P13807 737 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 CR2P20023 1033 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 CNTFP26441 200 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 ZNF134P52741 427 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 CHN2P52757 468 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 SEC24CP53992 1094 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 PRKAA2P54646 552 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 EIF5P55010 431 aaKnown RBP4.48□□□□□ -1.69
TDP1-207ENST00000553617 AP2B1P63010 937 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 TLE2Q04725 743 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 KCNAB1Q14722 419 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 ADCK5Q3MIX3 580 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 FAXCQ5TGI0 409 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 MANEALQ5VSG8 457 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 EFCAB12Q6NXP0 572 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 FAM43BQ6ZT52 329 aaPredicted RBP4.48□□□□□ -1.69
TDP1-207ENST00000553617 MED25Q71SY5 747 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 RSRC2Q7L4I2 434 aaKnown RBP4.48□□□□□ -1.69
TDP1-207ENST00000553617 SIAH1Q8IUQ4 282 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 SYT12Q8IV01 421 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 SLC44A2Q8IWA5 706 aaPredicted RBP4.48□□□□□ -1.69
TDP1-207ENST00000553617 FAM9BQ8IZU0 186 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 ESX1Q8N693 406 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 POU5F2Q8N7G0 328 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 SCAMP5Q8TAC9 235 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 POC1BQ8TC44 478 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 LRIG1Q96JA1 1093 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 FAM227BQ96M60 508 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 NEU1Q99519 415 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 CPPED1Q9BRF8 314 aaPredicted RBP4.48□□□□□ -1.69
TDP1-207ENST00000553617 RTKNQ9BST9 563 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 TTYH3Q9C0H2 523 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 TWSG1Q9GZX9 223 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 SEC61A2Q9H9S3 476 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 RIC8AQ9NPQ8 531 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 ZSCAN32Q9NX65 697 aa4.48□□□□□ -1.69
TDP1-207ENST00000553617 HECAQ9UBI9 543 aaPredicted RBP4.48□□□□□ -1.69
TDP1-207ENST00000553617 VPS51Q9UID3 782 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms