RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 LLGL2Q6P1M3 1020 aa15.79■□□□□ 0.12
MTHFD1-204ENST00000553405 MICALL1Q8N3F8 863 aa15.79■□□□□ 0.12
MTHFD1-204ENST00000553405 CMASQ8NFW8 434 aaPredicted RBP15.79■□□□□ 0.12
MTHFD1-204ENST00000553405 SPPL2BQ8TCT7 592 aa15.79■□□□□ 0.12
MTHFD1-204ENST00000553405 HNRNPABQ99729 332 aaKnown RBP15.79■□□□□ 0.12
MTHFD1-204ENST00000553405 ZNF518BQ9C0D4 1074 aa15.79■□□□□ 0.12
MTHFD1-204ENST00000553405 IGFLR1Q9H665 355 aa15.79■□□□□ 0.12
MTHFD1-204ENST00000553405 PCDHB4Q9Y5E5 795 aa15.79■□□□□ 0.12
MTHFD1-204ENST00000553405 PATJQ8NI35 1801 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 O00370 1275 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 CLDN5O00501 218 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 NCK2O43639 380 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 RFPL2O75678 378 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 ZMYND10O75800 440 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 POU2F2P09086 479 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 HAPLN1P10915 354 aaPredicted RBP15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 ATF6P18850 670 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 CYP2F1P24903 491 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 CCDC85BQ15834 202 aaPredicted RBP15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 PKDCCQ504Y2 493 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 PPP1R26Q5T8A7 1209 aaPredicted RBP15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 ANKRD54Q6NXT1 300 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 RTL10Q7L3V2 364 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 VSTM4Q8IW00 320 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 ZMIZ2Q8NF64 920 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 NEK11Q8NG66 645 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 OLIG1Q8TAK6 271 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 SLC2A14Q8TDB8 520 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 CASP10Q92851 521 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 S1PR5Q9H228 398 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 NLRC4Q9NPP4 1024 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 SLC27A5Q9Y2P5 690 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 PCDHB5Q9Y5E4 795 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 INSL5Q9Y5Q6 135 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 NOTCH4Q99466 2003 aa15.78■□□□□ 0.12
MTHFD1-204ENST00000553405 DOCK6Q96HP0 2047 aa15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 CYP26A1O43174 497 aa15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 SOAT2O75908 522 aa15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 C8AP07357 584 aa15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 HOXA9P31269 272 aa15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 MAPRE1Q15691 268 aaKnown RBP15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 E4F1Q66K89 784 aaPredicted RBP15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 FAM35AQ86V20 835 aa15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 TTC30AQ86WT1 665 aa15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 C12orf76Q8N812 135 aaPredicted RBP15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 SLC7A14Q8TBB6 771 aa15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 EDEM3Q9BZQ6 932 aa15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 CYP4F11Q9HBI6 524 aa15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 CSNK1G1Q9HCP0 422 aa15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 FAM49BQ9NUQ9 324 aa15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 DZANK1Q9NVP4 752 aa15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 ABI2Q9NYB9 513 aaPredicted RBP15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 KIAA1257Q9ULG3 409 aa15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 YIPF1Q9Y548 306 aa15.77■□□□□ 0.12
MTHFD1-204ENST00000553405 C2orf16Q68DN1 1984 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 GREB1Q4ZG55 1949 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 CBFA2T2O43439 604 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 BEST1O76090 585 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 GYPCP04921 128 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 CFHP08603 1231 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 VDRP11473 427 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 BDNFP23560 247 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 GPR15P49685 360 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 ZNF75DP51815 510 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 TBX2Q13207 712 aaPredicted RBP15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 RAPGEF1Q13905 1077 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 LCLAT1Q6UWP7 414 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 VSTM1Q6UX27 236 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 C4orf50Q6ZRC1 276 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 SLC47A2Q86VL8 602 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 MAFAQ8NHW3 353 aaPredicted RBP15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 DDX1Q92499 740 aaKnown RBP15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 CYFIP2Q96F07 1278 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 MRFAP1L1Q96HT8 127 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 HEXIM2Q96MH2 286 aaKnown RBP15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 SMOQ99835 787 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 UBE2ZQ9H832 354 aaPredicted RBP15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 ZDHHC7Q9NXF8 308 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 CLDND1Q9NY35 253 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 MYO6Q9UM54 1294 aa15.76■□□□□ 0.11
MTHFD1-204ENST00000553405 A0A1W2PQJ5 194 aa15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 HHLA1C9JL84 531 aa15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 HNRNPA1P09651 372 aaKnown RBP eCLIP15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 KRT5P13647 590 aa15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 BRD2P25440 801 aaKnown RBP15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 SOX5P35711 763 aa15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 CYP27A1Q02318 531 aa15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 CLEC20AQ6ZU45 233 aa15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 CCDC149Q6ZUS6 474 aa15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 SPATA2LQ8IUW3 424 aaPredicted RBP15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 C8orf48Q96LL4 319 aa15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 PCMTD1Q96MG8 357 aaPredicted RBP15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 SYT11Q9BT88 431 aa15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 LRRC3Q9BY71 257 aa15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 PRKD2Q9BZL6 878 aa15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 SFXN1Q9H9B4 322 aa15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 CDH22Q9UJ99 828 aa15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 NOCTQ9UK39 431 aaKnown RBP15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.75■□□□□ 0.11
MTHFD1-204ENST00000553405 DENND4AQ7Z401 1863 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms