RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 MTA3Q9BTC8 594 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 TEKT3Q9BXF9 490 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 MINDY3Q9H8M7 445 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 FBRSL1Q9HCM7 1045 aaKnown RBP5.67□□□□□ -1.5
CKAP4-203ENST00000553039 C6orf50Q9HD87 102 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 POLR3BQ9NW08 1133 aaPredicted RBP5.67□□□□□ -1.5
CKAP4-203ENST00000553039 ANKMY1Q9P2S6 941 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 PCOLCE2Q9UKZ9 415 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 FCF1Q9Y324 198 aaKnown RBP5.67□□□□□ -1.5
CKAP4-203ENST00000553039 PCDHGB7Q9Y5F8 929 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 HRH3Q9Y5N1 445 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 TNFSF14O43557 240 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 TSPAN1O60635 241 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 GJB3O75712 270 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 STK10O94804 968 aaKnown RBP5.66□□□□□ -1.5
CKAP4-203ENST00000553039 NPTXRO95502 500 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 ATXN1LP0C7T5 689 aaKnown RBP5.66□□□□□ -1.5
CKAP4-203ENST00000553039 ZNF883P0CG24 379 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 PCSK2P16519 638 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 ARF4P18085 180 aaPredicted RBP5.66□□□□□ -1.5
CKAP4-203ENST00000553039 TKTP29401 623 aaKnown RBP5.66□□□□□ -1.5
CKAP4-203ENST00000553039 CIITAP33076 1130 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 ACTN2P35609 894 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 HNF1BP35680 557 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 AVPR1AP37288 418 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 USP11P51784 963 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 RAB15P59190 212 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 RPL6Q02878 288 aaKnown RBP5.66□□□□□ -1.5
CKAP4-203ENST00000553039 DNM1Q05193 864 aaKnown RBP5.66□□□□□ -1.5
CKAP4-203ENST00000553039 BFSP1Q12934 665 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 UBAP2LQ14157 1087 aaKnown RBP5.66□□□□□ -1.5
CKAP4-203ENST00000553039 CTXN3Q4LDR2 81 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 WDR45BQ5MNZ6 344 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 EOGTQ5NDL2 527 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 JAKMIP3Q5VZ66 844 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 CASC1Q6TDU7 716 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 CWC27Q6UX04 472 aaKnown RBP5.66□□□□□ -1.5
CKAP4-203ENST00000553039 XKR5Q6UX68 686 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 PRICKLE2Q7Z3G6 844 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 DNAJB7Q7Z6W7 309 aaPredicted RBP5.66□□□□□ -1.5
CKAP4-203ENST00000553039 FERMT3Q86UX7 667 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 FMNL3Q8IVF7 1028 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 CPA6Q8N4T0 437 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 FANCBQ8NB91 859 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 USP33Q8TEY7 942 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 RLN3Q8WXF3 142 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 KCNB2Q92953 911 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 TMEM143Q96AN5 459 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 TMEM176AQ96HP8 235 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 PGBD1Q96JS3 809 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 GCNAQ96QF7 691 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 MTRQ99707 1265 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 NRSN2Q9GZP1 204 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 NXF3Q9H4D5 531 aaKnown RBP5.66□□□□□ -1.5
CKAP4-203ENST00000553039 EBF3Q9H4W6 596 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 C12orf49Q9H741 205 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 PRDM16Q9HAZ2 1276 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 DIAPH3Q9NSV4 1193 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 KCNK4Q9NYG8 393 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 TBX20Q9UMR3 447 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 SRPK3Q9UPE1 567 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 PCDHGB2Q9Y5G2 931 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 TEP1Q99973 2627 aaKnown RBP5.66□□□□□ -1.5
CKAP4-203ENST00000553039 DOCK5Q9H7D0 1870 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 MYH6P13533 1939 aa5.66□□□□□ -1.5
CKAP4-203ENST00000553039 TENM4Q6N022 2769 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 hCG_1642624A0A1W2PR95 340 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 SERTM1A2A2V5 107 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 MYMKA6NI61 221 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 PYCARD-AS1I3L0S3 204 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 FLRT2O43155 660 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 CHMP2AO43633 222 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 NDUFS2O75306 463 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 ZNF217O75362 1048 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 KRT38O76015 456 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 STBD1O95210 358 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 C1SP09871 688 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 GNA11P29992 359 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 CDC25CP30307 473 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 RPL9P32969 192 aaKnown RBP5.65□□□□□ -1.5
CKAP4-203ENST00000553039 GJA4P35212 333 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 GRM5P41594 1212 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 PDE1AP54750 535 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 INHBCP55103 352 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 ORC1Q13415 861 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 TCEAL1Q15170 157 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 UPP1Q16831 310 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 ANKRD45Q5TZF3 282 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 LRCH2Q5VUJ6 765 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 ZNF280DQ6N043 979 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 PCSK4Q6UW60 755 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 ATG14Q6ZNE5 492 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 DBX2Q6ZNG2 339 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 ANO5Q75V66 913 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 APBB1IPQ7Z5R6 666 aaPredicted RBP5.65□□□□□ -1.5
CKAP4-203ENST00000553039 JAZF1Q86VZ6 243 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 CMTM8Q8IZV2 173 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 MDGA1Q8NFP4 955 aa5.65□□□□□ -1.5
CKAP4-203ENST00000553039 SNIP1Q8TAD8 396 aaKnown RBP5.65□□□□□ -1.5
CKAP4-203ENST00000553039 OTUD7AQ8TE49 926 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms