RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 CAPN10Q9HC96 672 aa12.32□□□□□ -0.44
SUPT16H-202ENST00000552829 KNL1Q8NG31 2342 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 CCDC169A6NNP5 214 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 PPEF2O14830 753 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 EPB41L2O43491 1005 aaKnown RBP12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 TOM1L1O75674 476 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 CD2BP2O95400 341 aaKnown RBP12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 ADRB2P07550 413 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 CXCL8P10145 99 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 HAPLN1P10915 354 aaPredicted RBP12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 FDPSP14324 419 aaKnown RBP12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 NMT1P30419 496 aaKnown RBP12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 OPRD1P41143 372 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 SPAG1Q07617 926 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 USP4Q13107 963 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 MAPK7Q13164 816 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 PSMD2Q13200 908 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 MTF1Q14872 753 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 NOLC1Q14978 699 aaKnown RBP eCLIP12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 ZNF77Q15935 545 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 MAP7D1Q3KQU3 841 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 SLC39A12Q504Y0 691 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 DSTYKQ6XUX3 929 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 LRRTM3Q86VH5 581 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 FRMD1Q8N878 549 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 HNRNPLLQ8WVV9 542 aaKnown RBP12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 RLN3Q8WXF3 142 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 SENP8Q96LD8 212 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 SEPT5Q99719 369 aaPredicted RBP12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 NTPCRQ9BSD7 190 aaKnown RBP12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 HAPLN2Q9GZV7 340 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 BHMT2Q9H2M3 363 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 DKK4Q9UBT3 224 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 UBQLN1Q9UMX0 589 aaKnown RBP12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 SLC6A14Q9UN76 642 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 CYP46A1Q9Y6A2 500 aa12.31□□□□□ -0.44
SUPT16H-202ENST00000552829 CABIN1Q9Y6J0 2220 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 BTBD18B2RXH4 712 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 PFKFB2O60825 505 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 GJB3O75712 270 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 SERPINF2P08697 491 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 CLTAP09496 248 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 HARSP12081 509 aaKnown RBP12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 PAX3P23760 479 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 GUCY2FP51841 1108 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 ANAPC15P60006 121 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 MRPS21P82921 87 aaKnown RBP12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 FAM160A1Q05DH4 1040 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 MCL1Q07820 350 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 SMARCB1Q12824 385 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 DMP1Q13316 513 aaPredicted RBP12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 DUOXA1Q1HG43 343 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 MGAT5BQ3V5L5 792 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 C2orf27AQ580R0 203 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 HDDC3Q8N4P3 179 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 ERMNQ8TAM6 284 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 CEP76Q8TAP6 659 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 C2orf15Q8WU43 125 aaKnown RBP12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 ATP2A3Q93084 1043 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 SLC22A12Q96S37 553 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 KMT5AQ9NQR1 393 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 FSCN3Q9NQT6 498 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 DNAAF2Q9NVR5 837 aaKnown RBP12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 DUS2Q9NX74 493 aaKnown RBP12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 ORC3Q9UBD5 711 aaPredicted RBP12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 RAXQ9Y2V3 346 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 TCHHQ07283 1943 aa12.3□□□□□ -0.44
SUPT16H-202ENST00000552829 ZNF462Q96JM2 2506 aa12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 OPHN1O60890 802 aa12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 HIP1RO75146 1068 aa12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 TADA3O75528 432 aa12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 ODC1P11926 461 aa12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 TCF3P15923 654 aa12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 ITPKAP23677 461 aa12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 TRIP6Q15654 476 aaKnown RBP12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 SPATA1Q5VX52 437 aa12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 ARMCX6Q7L4S7 300 aa12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 MINDY1Q8N5J2 469 aa12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 CCDC33Q8N5R6 958 aa12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 MDM1Q8TC05 714 aa12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 SPPL2BQ8TCT7 592 aa12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 TSPAN18Q96SJ8 248 aa12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 LINC00597Q9H2U6 94 aa12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 TMEM206Q9H813 350 aa12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 WNT6Q9Y6F9 365 aa12.29□□□□□ -0.44
SUPT16H-202ENST00000552829 PTPRQQ9UMZ3 2332 aa12.28□□□□□ -0.44
SUPT16H-202ENST00000552829 ANO9A1A5B4 782 aa12.28□□□□□ -0.44
SUPT16H-202ENST00000552829 CYSRT1A8MQ03 144 aa12.28□□□□□ -0.44
SUPT16H-202ENST00000552829 LACTBL1A8MY62 500 aa12.28□□□□□ -0.44
SUPT16H-202ENST00000552829 PIRO00625 290 aa12.28□□□□□ -0.44
SUPT16H-202ENST00000552829 SLC16A4O15374 487 aa12.28□□□□□ -0.44
SUPT16H-202ENST00000552829 FAM189A1O60320 539 aa12.28□□□□□ -0.44
SUPT16H-202ENST00000552829 CFIP05156 583 aa12.28□□□□□ -0.44
SUPT16H-202ENST00000552829 IFNAR2P48551 515 aa12.28□□□□□ -0.44
SUPT16H-202ENST00000552829 CDR1P51861 262 aa12.28□□□□□ -0.44
SUPT16H-202ENST00000552829 GFPT1Q06210 699 aaPredicted RBP12.28□□□□□ -0.44
SUPT16H-202ENST00000552829 NR1H3Q13133 447 aa12.28□□□□□ -0.44
SUPT16H-202ENST00000552829 CAMK2BQ13554 666 aa12.28□□□□□ -0.44
SUPT16H-202ENST00000552829 TAF12Q16514 161 aa12.28□□□□□ -0.44
SUPT16H-202ENST00000552829 LYSMD4Q5XG99 296 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms