RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 SASH3O75995 380 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 STAU1O95793 577 aaKnown RBP10.6□□□□□ -0.71
LETMD1-234ENST00000552645 C8AP07357 584 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 PCSK1P29120 753 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 KCNQ1P51787 676 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 GSCP56915 257 aaPredicted RBP10.6□□□□□ -0.71
LETMD1-234ENST00000552645 CORO7P57737 925 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 ORC1Q13415 861 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 COL19A1Q14993 1142 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 TCP11X2Q5H9J9 407 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 PPM1LQ5SGD2 360 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 PTCRAQ6ISU1 281 aaPredicted RBP10.6□□□□□ -0.71
LETMD1-234ENST00000552645 CES5AQ6NT32 575 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 LILRA6Q6PI73 481 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 SYCE2Q6PIF2 218 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 TMEM184AQ6ZMB5 413 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 DPH6Q7L8W6 267 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 ATAD1Q8NBU5 361 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 LRRN4CLQ8ND94 238 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 FEZF2Q8TBJ5 459 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 TATDN2Q93075 761 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 BPIFA3Q9BQP9 254 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 TUBGCP2Q9BSJ2 902 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 OXCT2Q9BYC2 517 aaPredicted RBP10.6□□□□□ -0.71
LETMD1-234ENST00000552645 NIF3L1Q9GZT8 377 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 ZCWPW1Q9H0M4 648 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 PLEKHA4Q9H4M7 779 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 VRTNQ9H8Y1 702 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 SFXN1Q9H9B4 322 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 PIDD1Q9HB75 910 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 ARFGAP3Q9NP61 516 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 ABI2Q9NYB9 513 aaPredicted RBP10.6□□□□□ -0.71
LETMD1-234ENST00000552645 TAB2Q9NYJ8 693 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 CDH22Q9UJ99 828 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 ADAM21Q9UKJ8 722 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 GTF3C4Q9UKN8 822 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 SLC27A5Q9Y2P5 690 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 CEP83Q9Y592 693 aa10.6□□□□□ -0.71
LETMD1-234ENST00000552645 CCDC151A5D8V7 595 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 BECN2A8MW95 431 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 CCL16O15467 120 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 SOAT2O75908 522 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 ABLIM3O94929 683 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 SEC24AO95486 1093 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 CCDC172P0C7W6 258 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 ATF2P15336 505 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 HOXB8P17481 243 aaPredicted RBP10.59□□□□□ -0.71
LETMD1-234ENST00000552645 WARSP23381 471 aaKnown RBP10.59□□□□□ -0.71
LETMD1-234ENST00000552645 ASPAP45381 313 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 GYS2P54840 703 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 MRPS5P82675 430 aaKnown RBP10.59□□□□□ -0.71
LETMD1-234ENST00000552645 CYP27A1Q02318 531 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 DUSP4Q13115 394 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 GPR17Q13304 367 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 MAN2A1Q16706 1144 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 CCDC142Q17RM4 750 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 AAK1Q2M2I8 961 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 TPGS2Q68CL5 300 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 CCDC149Q6ZUS6 474 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 LRRTM3Q86VH5 581 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 PACS2Q86VP3 889 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.59□□□□□ -0.71
LETMD1-234ENST00000552645 DHX40Q8IX18 779 aaKnown RBP10.59□□□□□ -0.71
LETMD1-234ENST00000552645 DCP1BQ8IZD4 617 aaKnown RBP10.59□□□□□ -0.71
LETMD1-234ENST00000552645 TTC9BQ8N6N2 239 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 MSLNLQ96KJ4 702 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 SEPT5Q99719 369 aaPredicted RBP10.59□□□□□ -0.71
LETMD1-234ENST00000552645 LPIN3Q9BQK8 851 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 SYT15Q9BQS2 421 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 ACBD6Q9BR61 282 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 FUT8Q9BYC5 575 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 SDCBP2Q9H190 292 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 VPS16Q9H269 839 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 GCNT4Q9P109 453 aa10.59□□□□□ -0.71
LETMD1-234ENST00000552645 AFF4Q9UHB7 1163 aaKnown RBP10.59□□□□□ -0.71
LETMD1-234ENST00000552645 MYBPHLA2RUH7 354 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 MTMR11A4FU01 709 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 MAP2K7O14733 419 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 GABRDO14764 452 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 TACC1O75410 805 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 ZMYND10O75800 440 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 LRG1P02750 347 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 SP100P23497 879 aaPredicted RBP10.58□□□□□ -0.72
LETMD1-234ENST00000552645 EEF1GP26641 437 aaKnown RBP10.58□□□□□ -0.72
LETMD1-234ENST00000552645 MCCD1P59942 119 aaPredicted RBP10.58□□□□□ -0.72
LETMD1-234ENST00000552645 BRD3Q15059 726 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 MGAT5BQ3V5L5 792 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 LEXMQ3ZCV2 418 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 VWA3BQ502W6 1294 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 ZNF394Q53GI3 561 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 MDH1BQ5I0G3 518 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 INTS6LQ5JSJ4 861 aaKnown RBP10.58□□□□□ -0.72
LETMD1-234ENST00000552645 MMS22LQ6ZRQ5 1243 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 ACOT1Q86TX2 421 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 PPM1KQ8N3J5 372 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 SMRP1Q8NCR6 262 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 ANKRD20A12PQ8NF67 263 aa10.58□□□□□ -0.72
LETMD1-234ENST00000552645 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.58□□□□□ -0.72
LETMD1-234ENST00000552645 HNRNPLLQ8WVV9 542 aaKnown RBP10.58□□□□□ -0.72
LETMD1-234ENST00000552645 SMG7Q92540 1137 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms