RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 EDEM2Q9BV94 578 aa23.3■■□□□ 1.32
SMARCD1-212ENST00000551966 LINC00597Q9H2U6 94 aa23.3■■□□□ 1.32
SMARCD1-212ENST00000551966 L1RE1Q9UN81 338 aa23.3■■□□□ 1.32
SMARCD1-212ENST00000551966 WNT6Q9Y6F9 365 aa23.3■■□□□ 1.32
SMARCD1-212ENST00000551966 CHD6Q8TD26 2715 aa23.3■■□□□ 1.32
SMARCD1-212ENST00000551966 C1QTNF9BB2RNN3 333 aa23.29■■□□□ 1.32
SMARCD1-212ENST00000551966 APBB3O95704 486 aa23.29■■□□□ 1.32
SMARCD1-212ENST00000551966 C1QTNF9P0C862 333 aa23.29■■□□□ 1.32
SMARCD1-212ENST00000551966 ACAT1P24752 427 aaKnown RBP23.29■■□□□ 1.32
SMARCD1-212ENST00000551966 TSPY1Q01534 308 aa23.29■■□□□ 1.32
SMARCD1-212ENST00000551966 NFE2Q16621 373 aaPredicted RBP23.29■■□□□ 1.32
SMARCD1-212ENST00000551966 CCDC142Q17RM4 750 aa23.29■■□□□ 1.32
SMARCD1-212ENST00000551966 EML3Q32P44 896 aa23.29■■□□□ 1.32
SMARCD1-212ENST00000551966 ZNF720Q7Z2F6 126 aa23.29■■□□□ 1.32
SMARCD1-212ENST00000551966 CPA6Q8N4T0 437 aa23.29■■□□□ 1.32
SMARCD1-212ENST00000551966 LEO1Q8WVC0 666 aaPredicted RBP23.29■■□□□ 1.32
SMARCD1-212ENST00000551966 TRMT2BQ96GJ1 504 aaKnown RBP23.29■■□□□ 1.32
SMARCD1-212ENST00000551966 ACBD6Q9BR61 282 aa23.29■■□□□ 1.32
SMARCD1-212ENST00000551966 GCNT4Q9P109 453 aa23.29■■□□□ 1.32
SMARCD1-212ENST00000551966 GTF3C4Q9UKN8 822 aa23.29■■□□□ 1.32
SMARCD1-212ENST00000551966 WASF3Q9UPY6 502 aa23.29■■□□□ 1.32
SMARCD1-212ENST00000551966 LAMA1P25391 3075 aa23.29■■□□□ 1.32
SMARCD1-212ENST00000551966 NOVA1P51513 510 aaKnown RBP23.28■■□□□ 1.32
SMARCD1-212ENST00000551966 DGKEP52429 567 aa23.28■■□□□ 1.32
SMARCD1-212ENST00000551966 RPL10AP62906 217 aaKnown RBP23.28■■□□□ 1.32
SMARCD1-212ENST00000551966 PSMD2Q13200 908 aa23.28■■□□□ 1.32
SMARCD1-212ENST00000551966 TTC16Q8NEE8 873 aa23.28■■□□□ 1.32
SMARCD1-212ENST00000551966 CXorf38Q8TB03 319 aa23.28■■□□□ 1.32
SMARCD1-212ENST00000551966 STRA6Q9BX79 667 aa23.28■■□□□ 1.32
SMARCD1-212ENST00000551966 TRPC7Q9HCX4 862 aa23.28■■□□□ 1.32
SMARCD1-212ENST00000551966 DDX43Q9NXZ2 648 aaKnown RBP23.28■■□□□ 1.32
SMARCD1-212ENST00000551966 AGAP1Q9UPQ3 857 aa23.28■■□□□ 1.32
SMARCD1-212ENST00000551966 FRYQ5TBA9 3013 aa23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 LNP1A1A4G5 178 aa23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 HCRTO43612 131 aa23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 TBCAO75347 108 aaKnown RBP23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 IL18RAPO95256 599 aa23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 USP17L7P0C7H9 530 aa23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 ABCD1P33897 745 aa23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 DDIT3P35638 169 aa23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 KCNA1Q09470 495 aa23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 USP4Q13107 963 aa23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 INTS6LQ5JSJ4 861 aaKnown RBP23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 OSTM1Q86WC4 334 aa23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 NT5DC4Q86YG4 428 aa23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 ARL14EPQ8N8R7 260 aaPredicted RBP23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 C1orf127Q8N9H9 656 aa23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 POMGNT1Q8WZA1 660 aa23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 FAM84AQ96KN4 292 aa23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 ABCB6Q9NP58 842 aa23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 PPP4R2Q9NY27 417 aa23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 UXTQ9UBK9 157 aaPredicted RBP23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 MYO16Q9Y6X6 1858 aa23.27■■□□□ 1.32
SMARCD1-212ENST00000551966 ABCA7Q8IZY2 2146 aa23.26■■□□□ 1.31
SMARCD1-212ENST00000551966 C2orf78A6NCI8 922 aa23.26■■□□□ 1.31
SMARCD1-212ENST00000551966 K7EQS6 105 aa23.26■■□□□ 1.31
SMARCD1-212ENST00000551966 POLR2BP30876 1174 aaKnown RBP23.26■■□□□ 1.31
SMARCD1-212ENST00000551966 PNPLA4P41247 253 aa23.26■■□□□ 1.31
SMARCD1-212ENST00000551966 IFNAR2P48551 515 aa23.26■■□□□ 1.31
SMARCD1-212ENST00000551966 ZXDBP98169 803 aa23.26■■□□□ 1.31
SMARCD1-212ENST00000551966 PMS2CLQ68D20 193 aa23.26■■□□□ 1.31
SMARCD1-212ENST00000551966 LARP4BQ92615 738 aaKnown RBP23.26■■□□□ 1.31
SMARCD1-212ENST00000551966 ATP2A3Q93084 1043 aa23.26■■□□□ 1.31
SMARCD1-212ENST00000551966 EXOC4Q96A65 974 aa23.26■■□□□ 1.31
SMARCD1-212ENST00000551966 ACDQ96AP0 544 aa23.26■■□□□ 1.31
SMARCD1-212ENST00000551966 ZNF560Q96MR9 790 aa23.26■■□□□ 1.31
SMARCD1-212ENST00000551966 TPSD1Q9BZJ3 242 aa23.26■■□□□ 1.31
SMARCD1-212ENST00000551966 TMEM206Q9H813 350 aa23.26■■□□□ 1.31
SMARCD1-212ENST00000551966 KIAA1549LQ6ZVL6 1849 aa23.25■■□□□ 1.31
SMARCD1-212ENST00000551966 TRAV19A0A0A6YYK7 116 aa23.25■■□□□ 1.31
SMARCD1-212ENST00000551966 PATE3B3GLJ2 98 aa23.25■■□□□ 1.31
SMARCD1-212ENST00000551966 CDX4O14627 284 aaPredicted RBP23.25■■□□□ 1.31
SMARCD1-212ENST00000551966 PPP1R37O75864 691 aa23.25■■□□□ 1.31
SMARCD1-212ENST00000551966 TOP3BO95985 862 aaKnown RBP23.25■■□□□ 1.31
SMARCD1-212ENST00000551966 ITGB3P05106 788 aa23.25■■□□□ 1.31
SMARCD1-212ENST00000551966 SPINK2P20155 84 aa23.25■■□□□ 1.31
SMARCD1-212ENST00000551966 GBP1P32455 592 aa23.25■■□□□ 1.31
SMARCD1-212ENST00000551966 TFAMQ00059 246 aaKnown RBP23.25■■□□□ 1.31
SMARCD1-212ENST00000551966 SH3PXD2AQ5TCZ1 1133 aa23.25■■□□□ 1.31
SMARCD1-212ENST00000551966 SFR1Q86XK3 245 aa23.25■■□□□ 1.31
SMARCD1-212ENST00000551966 SH3RF2Q8TEC5 729 aa23.25■■□□□ 1.31
SMARCD1-212ENST00000551966 USP33Q8TEY7 942 aa23.25■■□□□ 1.31
SMARCD1-212ENST00000551966 FAM213AQ9BRX8 229 aa23.25■■□□□ 1.31
SMARCD1-212ENST00000551966 KIF3AQ9Y496 699 aa23.25■■□□□ 1.31
SMARCD1-212ENST00000551966 HUS1O60921 280 aa23.24■■□□□ 1.31
SMARCD1-212ENST00000551966 CKMP06732 381 aa23.24■■□□□ 1.31
SMARCD1-212ENST00000551966 BCKDHBP21953 392 aa23.24■■□□□ 1.31
SMARCD1-212ENST00000551966 GJB2P29033 226 aa23.24■■□□□ 1.31
SMARCD1-212ENST00000551966 OPRD1P41143 372 aa23.24■■□□□ 1.31
SMARCD1-212ENST00000551966 POSTNQ15063 836 aa23.24■■□□□ 1.31
SMARCD1-212ENST00000551966 GAB4Q2WGN9 574 aa23.24■■□□□ 1.31
SMARCD1-212ENST00000551966 DAB2IPQ5VWQ8 1189 aa23.24■■□□□ 1.31
SMARCD1-212ENST00000551966 UNQ6494/PRO21346Q6UXR6 183 aa23.24■■□□□ 1.31
SMARCD1-212ENST00000551966 DYMQ7RTS9 669 aa23.24■■□□□ 1.31
SMARCD1-212ENST00000551966 RASSF3Q86WH2 238 aa23.24■■□□□ 1.31
SMARCD1-212ENST00000551966 TSTD1Q8NFU3 115 aa23.24■■□□□ 1.31
SMARCD1-212ENST00000551966 TMEM121BQ9BXQ6 578 aaPredicted RBP23.24■■□□□ 1.31
SMARCD1-212ENST00000551966 GDAP2Q9NXN4 497 aa23.24■■□□□ 1.31
SMARCD1-212ENST00000551966 ZMIZ1Q9ULJ6 1067 aa23.24■■□□□ 1.31
SMARCD1-212ENST00000551966 H3BQV1 296 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms