RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 PCDHB9Q9Y5E1 797 aa16.52■□□□□ 0.24
CACNB3-220ENST00000551716 ADAMTS20P59510 1910 aa16.52■□□□□ 0.23
CACNB3-220ENST00000551716 FREM2Q5SZK8 3169 aa16.52■□□□□ 0.23
CACNB3-220ENST00000551716 CITO14578 2027 aa16.52■□□□□ 0.23
CACNB3-220ENST00000551716 SMG1Q96Q15 3661 aaKnown RBP16.51■□□□□ 0.23
CACNB3-220ENST00000551716 KIF26AQ9ULI4 1882 aaPredicted RBP16.51■□□□□ 0.23
CACNB3-220ENST00000551716 MYMKA6NI61 221 aa16.51■□□□□ 0.23
CACNB3-220ENST00000551716 PIRO00625 290 aa16.51■□□□□ 0.23
CACNB3-220ENST00000551716 AP5Z1O43299 807 aa16.51■□□□□ 0.23
CACNB3-220ENST00000551716 CKMP06732 381 aa16.51■□□□□ 0.23
CACNB3-220ENST00000551716 SYPP08247 313 aa16.51■□□□□ 0.23
CACNB3-220ENST00000551716 PDE6CP51160 858 aa16.51■□□□□ 0.23
CACNB3-220ENST00000551716 TRIP6Q15654 476 aaKnown RBP16.51■□□□□ 0.23
CACNB3-220ENST00000551716 ZNF77Q15935 545 aa16.51■□□□□ 0.23
CACNB3-220ENST00000551716 NFE2Q16621 373 aaPredicted RBP16.51■□□□□ 0.23
CACNB3-220ENST00000551716 EOGTQ5NDL2 527 aa16.51■□□□□ 0.23
CACNB3-220ENST00000551716 C9orf57Q5W0N0 161 aa16.51■□□□□ 0.23
CACNB3-220ENST00000551716 CCNI2Q6ZMN8 369 aaPredicted RBP16.51■□□□□ 0.23
CACNB3-220ENST00000551716 CENPQQ7L2Z9 268 aaPredicted RBP16.51■□□□□ 0.23
CACNB3-220ENST00000551716 ARMCX6Q7L4S7 300 aa16.51■□□□□ 0.23
CACNB3-220ENST00000551716 EFCAB13Q8IY85 973 aa16.51■□□□□ 0.23
CACNB3-220ENST00000551716 CCDC33Q8N5R6 958 aa16.51■□□□□ 0.23
CACNB3-220ENST00000551716 FSIP1Q8NA03 581 aa16.51■□□□□ 0.23
CACNB3-220ENST00000551716 TMEM161BQ8NDZ6 487 aa16.51■□□□□ 0.23
CACNB3-220ENST00000551716 RIN3Q8TB24 985 aa16.51■□□□□ 0.23
CACNB3-220ENST00000551716 BCCIPQ9P287 314 aaKnown RBP eCLIP16.51■□□□□ 0.23
CACNB3-220ENST00000551716 MAGED2Q9UNF1 606 aaPredicted RBP16.51■□□□□ 0.23
CACNB3-220ENST00000551716 WNT6Q9Y6F9 365 aa16.51■□□□□ 0.23
CACNB3-220ENST00000551716 HELZ2Q9BYK8 2649 aaKnown RBP16.51■□□□□ 0.23
CACNB3-220ENST00000551716 THADAQ6YHU6 1953 aa16.51■□□□□ 0.23
CACNB3-220ENST00000551716 CYB561D2O14569 222 aa16.5■□□□□ 0.23
CACNB3-220ENST00000551716 MAPTP10636 758 aaKnown RBP16.5■□□□□ 0.23
CACNB3-220ENST00000551716 PLS3P13797 630 aa16.5■□□□□ 0.23
CACNB3-220ENST00000551716 TCF3P15923 654 aa16.5■□□□□ 0.23
CACNB3-220ENST00000551716 SCP2P22307 547 aa16.5■□□□□ 0.23
CACNB3-220ENST00000551716 GUCY2CP25092 1073 aa16.5■□□□□ 0.23
CACNB3-220ENST00000551716 SEC13P55735 322 aa16.5■□□□□ 0.23
CACNB3-220ENST00000551716 RPL10AP62906 217 aaKnown RBP16.5■□□□□ 0.23
CACNB3-220ENST00000551716 IRX6P78412 446 aaPredicted RBP16.5■□□□□ 0.23
CACNB3-220ENST00000551716 ZNF174Q15697 407 aa16.5■□□□□ 0.23
CACNB3-220ENST00000551716 RINT1Q6NUQ1 792 aa16.5■□□□□ 0.23
CACNB3-220ENST00000551716 SLC36A4Q6YBV0 504 aa16.5■□□□□ 0.23
CACNB3-220ENST00000551716 C1orf186Q6ZWK4 172 aa16.5■□□□□ 0.23
CACNB3-220ENST00000551716 LRRTM3Q86VH5 581 aa16.5■□□□□ 0.23
CACNB3-220ENST00000551716 KIAA1958Q8N8K9 716 aa16.5■□□□□ 0.23
CACNB3-220ENST00000551716 RLN3Q8WXF3 142 aa16.5■□□□□ 0.23
CACNB3-220ENST00000551716 BICD1Q96G01 975 aa16.5■□□□□ 0.23
CACNB3-220ENST00000551716 TRMT2BQ96GJ1 504 aaKnown RBP16.5■□□□□ 0.23
CACNB3-220ENST00000551716 MYRFLQ96LU7 910 aa16.5■□□□□ 0.23
CACNB3-220ENST00000551716 DNAAF2Q9NVR5 837 aaKnown RBP16.5■□□□□ 0.23
CACNB3-220ENST00000551716 DERAQ9Y315 318 aa16.5■□□□□ 0.23
CACNB3-220ENST00000551716 ASH1LQ9NR48 2969 aaKnown RBP16.49■□□□□ 0.23
CACNB3-220ENST00000551716 ANO9A1A5B4 782 aa16.49■□□□□ 0.23
CACNB3-220ENST00000551716 SFI1A8K8P3 1242 aa16.49■□□□□ 0.23
CACNB3-220ENST00000551716 ARHGAP33O14559 1287 aa16.49■□□□□ 0.23
CACNB3-220ENST00000551716 PRPF40AO75400 957 aaKnown RBP16.49■□□□□ 0.23
CACNB3-220ENST00000551716 ITPKAP23677 461 aa16.49■□□□□ 0.23
CACNB3-220ENST00000551716 GUCY2FP51841 1108 aa16.49■□□□□ 0.23
CACNB3-220ENST00000551716 FAM193AP78312 1265 aa16.49■□□□□ 0.23
CACNB3-220ENST00000551716 TSPY1Q01534 308 aa16.49■□□□□ 0.23
CACNB3-220ENST00000551716 MAPK7Q13164 816 aa16.49■□□□□ 0.23
CACNB3-220ENST00000551716 ENOX2Q16206 610 aaKnown RBP16.49■□□□□ 0.23
CACNB3-220ENST00000551716 MAP7D1Q3KQU3 841 aa16.49■□□□□ 0.23
CACNB3-220ENST00000551716 TMEM92Q6UXU6 159 aa16.49■□□□□ 0.23
CACNB3-220ENST00000551716 TTC16Q8NEE8 873 aa16.49■□□□□ 0.23
CACNB3-220ENST00000551716 HNRNPLLQ8WVV9 542 aaKnown RBP16.49■□□□□ 0.23
CACNB3-220ENST00000551716 RUSC1Q9BVN2 902 aa16.49■□□□□ 0.23
CACNB3-220ENST00000551716 CAPN10Q9HC96 672 aa16.49■□□□□ 0.23
CACNB3-220ENST00000551716 TRPC7Q9HCX4 862 aa16.49■□□□□ 0.23
CACNB3-220ENST00000551716 APOBEC2Q9Y235 224 aaKnown RBP16.49■□□□□ 0.23
CACNB3-220ENST00000551716 E9PMD0 336 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 PPEF2O14830 753 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 OGTO15294 1046 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 CD59P13987 128 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 PFKLP17858 780 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 OPRD1P41143 372 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 C19orf57Q0VDD7 668 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 USP4Q13107 963 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 KRT79Q5XKE5 535 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 PGBD3Q8N328 593 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 TMEM130Q8N3G9 435 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 MINDY1Q8N5J2 469 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 KCTD17Q8N5Z5 321 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 SH3RF2Q8TEC5 729 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 SNX29Q8TEQ0 813 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 CYP2S1Q96SQ9 504 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 PYM1Q9BRP8 204 aaKnown RBP16.48■□□□□ 0.23
CACNB3-220ENST00000551716 LINC00597Q9H2U6 94 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 ABCB6Q9NP58 842 aa16.48■□□□□ 0.23
CACNB3-220ENST00000551716 A0A0A0MRY4 1105 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 DTNBO60941 627 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 NOL4O94818 638 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 HDCP19113 662 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 EIF2DP41214 584 aaKnown RBP16.47■□□□□ 0.23
CACNB3-220ENST00000551716 TNFSF9P41273 254 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 TAF6P49848 677 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 LIG4P49917 911 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 NBR1Q14596 966 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 KCNB1Q14721 858 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 TMEM132DQ14C87 1099 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms