RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 NPTX2P47972 431 aa15.65■□□□□ 0.1
VPS29-209ENST00000551655 TUFMP49411 452 aaKnown RBP15.65■□□□□ 0.1
VPS29-209ENST00000551655 RPL6Q02878 288 aaKnown RBP15.65■□□□□ 0.1
VPS29-209ENST00000551655 USP4Q13107 963 aa15.65■□□□□ 0.1
VPS29-209ENST00000551655 HNRNPDQ14103 355 aaKnown RBP15.65■□□□□ 0.1
VPS29-209ENST00000551655 GAB4Q2WGN9 574 aa15.65■□□□□ 0.1
VPS29-209ENST00000551655 ZC2HC1CQ53FD0 456 aaPredicted RBP15.65■□□□□ 0.1
VPS29-209ENST00000551655 LRRTM3Q86VH5 581 aa15.65■□□□□ 0.1
VPS29-209ENST00000551655 MON1AQ86VX9 555 aa15.65■□□□□ 0.1
VPS29-209ENST00000551655 IL17RCQ8NAC3 791 aa15.65■□□□□ 0.1
VPS29-209ENST00000551655 ATP2A3Q93084 1043 aa15.65■□□□□ 0.1
VPS29-209ENST00000551655 ZCWPW1Q9H0M4 648 aa15.65■□□□□ 0.1
VPS29-209ENST00000551655 TRPC7Q9HCX4 862 aa15.65■□□□□ 0.1
VPS29-209ENST00000551655 POLMQ9NP87 494 aaPredicted RBP15.65■□□□□ 0.1
VPS29-209ENST00000551655 TCRBV21S2A2A0A5A6 115 aa15.64■□□□□ 0.09
VPS29-209ENST00000551655 HAPLN1P10915 354 aaPredicted RBP15.64■□□□□ 0.09
VPS29-209ENST00000551655 TYMPP19971 482 aa15.64■□□□□ 0.09
VPS29-209ENST00000551655 ITPKBP27987 946 aa15.64■□□□□ 0.09
VPS29-209ENST00000551655 ZNF268Q14587 947 aaPredicted RBP15.64■□□□□ 0.09
VPS29-209ENST00000551655 ECM1Q16610 540 aa15.64■□□□□ 0.09
VPS29-209ENST00000551655 ZNF605Q86T29 641 aa15.64■□□□□ 0.09
VPS29-209ENST00000551655 PGBD3Q8N328 593 aa15.64■□□□□ 0.09
VPS29-209ENST00000551655 ZNF843Q8N446 348 aa15.64■□□□□ 0.09
VPS29-209ENST00000551655 CEP76Q8TAP6 659 aa15.64■□□□□ 0.09
VPS29-209ENST00000551655 MRPS31Q92665 395 aaKnown RBP15.64■□□□□ 0.09
VPS29-209ENST00000551655 SENP8Q96LD8 212 aa15.64■□□□□ 0.09
VPS29-209ENST00000551655 ABI2Q9NYB9 513 aaPredicted RBP15.64■□□□□ 0.09
VPS29-209ENST00000551655 HSFX1Q9UBD0 423 aa15.64■□□□□ 0.09
VPS29-209ENST00000551655 A0A087WV48 116 aa15.63■□□□□ 0.09
VPS29-209ENST00000551655 TRABD2BA6NFA1 517 aa15.63■□□□□ 0.09
VPS29-209ENST00000551655 ATXN7O15265 892 aaPredicted RBP15.63■□□□□ 0.09
VPS29-209ENST00000551655 DDX6P26196 483 aaKnown RBP eCLIP15.63■□□□□ 0.09
VPS29-209ENST00000551655 HOXD12P35452 270 aa15.63■□□□□ 0.09
VPS29-209ENST00000551655 TNFSF9P41273 254 aa15.63■□□□□ 0.09
VPS29-209ENST00000551655 SLC6A11P48066 632 aa15.63■□□□□ 0.09
VPS29-209ENST00000551655 FAM160A1Q05DH4 1040 aa15.63■□□□□ 0.09
VPS29-209ENST00000551655 ZNF33AQ06730 810 aa15.63■□□□□ 0.09
VPS29-209ENST00000551655 NOLC1Q14978 699 aaKnown RBP eCLIP15.63■□□□□ 0.09
VPS29-209ENST00000551655 ZBTB6Q15916 424 aa15.63■□□□□ 0.09
VPS29-209ENST00000551655 LMBRD2Q68DH5 695 aaPredicted RBP15.63■□□□□ 0.09
VPS29-209ENST00000551655 SLC41A1Q8IVJ1 513 aa15.63■□□□□ 0.09
VPS29-209ENST00000551655 DAW1Q8N136 415 aa15.63■□□□□ 0.09
VPS29-209ENST00000551655 KIFAP3Q92845 792 aa15.63■□□□□ 0.09
VPS29-209ENST00000551655 ERLEC1Q96DZ1 483 aa15.63■□□□□ 0.09
VPS29-209ENST00000551655 HAPLN2Q9GZV7 340 aa15.63■□□□□ 0.09
VPS29-209ENST00000551655 BHMT2Q9H2M3 363 aa15.63■□□□□ 0.09
VPS29-209ENST00000551655 ARHGAP28Q9P2N2 729 aa15.63■□□□□ 0.09
VPS29-209ENST00000551655 DKK4Q9UBT3 224 aa15.63■□□□□ 0.09
VPS29-209ENST00000551655 APOBEC2Q9Y235 224 aaKnown RBP15.63■□□□□ 0.09
VPS29-209ENST00000551655 ANAPC1Q9H1A4 1944 aa15.62■□□□□ 0.09
VPS29-209ENST00000551655 MUC22E2RYF6 1773 aaPredicted RBP15.62■□□□□ 0.09
VPS29-209ENST00000551655 FAM149AA5PLN7 773 aa15.62■□□□□ 0.09
VPS29-209ENST00000551655 PYCARD-AS1I3L0S3 204 aa15.62■□□□□ 0.09
VPS29-209ENST00000551655 SCAMP3O14828 347 aaKnown RBP15.62■□□□□ 0.09
VPS29-209ENST00000551655 AP5Z1O43299 807 aa15.62■□□□□ 0.09
VPS29-209ENST00000551655 ADAM23O75077 832 aa15.62■□□□□ 0.09
VPS29-209ENST00000551655 CBFA2T3O75081 653 aa15.62■□□□□ 0.09
VPS29-209ENST00000551655 CKMP06732 381 aa15.62■□□□□ 0.09
VPS29-209ENST00000551655 ODC1P11926 461 aa15.62■□□□□ 0.09
VPS29-209ENST00000551655 DPP6P42658 865 aa15.62■□□□□ 0.09
VPS29-209ENST00000551655 ABCG1P45844 678 aa15.62■□□□□ 0.09
VPS29-209ENST00000551655 LILRA4P59901 499 aa15.62■□□□□ 0.09
VPS29-209ENST00000551655 TMPRSS7Q7RTY8 843 aa15.62■□□□□ 0.09
VPS29-209ENST00000551655 SH3RF2Q8TEC5 729 aa15.62■□□□□ 0.09
VPS29-209ENST00000551655 TMEM134Q9H6X4 195 aa15.62■□□□□ 0.09
VPS29-209ENST00000551655 TMLHEQ9NVH6 421 aa15.62■□□□□ 0.09
VPS29-209ENST00000551655 ZMYM5Q9UJ78 669 aa15.62■□□□□ 0.09
VPS29-209ENST00000551655 TTC26A0AVF1 554 aa15.61■□□□□ 0.09
VPS29-209ENST00000551655 GOLGA8CPA6NN73 597 aa15.61■□□□□ 0.09
VPS29-209ENST00000551655 SLC16A4O15374 487 aa15.61■□□□□ 0.09
VPS29-209ENST00000551655 KRT2P35908 639 aa15.61■□□□□ 0.09
VPS29-209ENST00000551655 MRPS21P82921 87 aaKnown RBP15.61■□□□□ 0.09
VPS29-209ENST00000551655 PLEKHG6Q3KR16 790 aa15.61■□□□□ 0.09
VPS29-209ENST00000551655 SPDYCQ5MJ68 293 aa15.61■□□□□ 0.09
VPS29-209ENST00000551655 CPLX2Q6PUV4 134 aaKnown RBP15.61■□□□□ 0.09
VPS29-209ENST00000551655 C12orf40Q86WS4 652 aa15.61■□□□□ 0.09
VPS29-209ENST00000551655 LURAP1LQ8IV03 231 aa15.61■□□□□ 0.09
VPS29-209ENST00000551655 SCUBE3Q8IX30 993 aa15.61■□□□□ 0.09
VPS29-209ENST00000551655 ARL14EPQ8N8R7 260 aaPredicted RBP15.61■□□□□ 0.09
VPS29-209ENST00000551655 CCDC26Q8TAB7 109 aa15.61■□□□□ 0.09
VPS29-209ENST00000551655 HSPA12BQ96MM6 686 aa15.61■□□□□ 0.09
VPS29-209ENST00000551655 PI4K2AQ9BTU6 479 aa15.61■□□□□ 0.09
VPS29-209ENST00000551655 KMT5AQ9NQR1 393 aa15.61■□□□□ 0.09
VPS29-209ENST00000551655 TOR4AQ9NXH8 423 aa15.61■□□□□ 0.09
VPS29-209ENST00000551655 PCOLCE2Q9UKZ9 415 aa15.61■□□□□ 0.09
VPS29-209ENST00000551655 UBQLN1Q9UMX0 589 aaKnown RBP15.61■□□□□ 0.09
VPS29-209ENST00000551655 GOLGA4Q13439 2230 aaKnown RBP15.61■□□□□ 0.09
VPS29-209ENST00000551655 SCN1AP35498 2009 aa15.61■□□□□ 0.09
VPS29-209ENST00000551655 ATMQ13315 3056 aa15.61■□□□□ 0.09
VPS29-209ENST00000551655 TCHHQ07283 1943 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 MYOFQ9NZM1 2061 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 C2orf78A6NCI8 922 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 LACTBL1A8MY62 500 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 HIP1RO75146 1068 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 SYPP08247 313 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 ATXN1LP0C7T5 689 aaKnown RBP15.6■□□□□ 0.09
VPS29-209ENST00000551655 RPA1P27694 616 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 FOSBP53539 338 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 ZXDBP98169 803 aa15.6■□□□□ 0.09
VPS29-209ENST00000551655 KDSRQ06136 332 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms