RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 POMKQ9H5K3 350 aa16.15■□□□□ 0.18
SMARCD1-211ENST00000551497 UBE2TQ9NPD8 197 aaPredicted RBP16.15■□□□□ 0.18
SMARCD1-211ENST00000551497 GTPBP10A4D1E9 387 aaKnown RBP16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 BECN2A8MW95 431 aa16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 RNF225M0QZC1 329 aaPredicted RBP16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 ATF6P18850 670 aa16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 ACO1P21399 889 aaKnown RBP16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 MTHFRP42898 656 aa16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 ALDH1A3P47895 512 aa16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 TUFMP49411 452 aaKnown RBP16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 RAD23BP54727 409 aa16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 MAPRE1Q15691 268 aaKnown RBP16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 DDR2Q16832 855 aa16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 HS6ST3Q8IZP7 471 aa16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 UBR7Q8N806 425 aa16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 STKLD1Q8NE28 680 aa16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 TNIP3Q96KP6 325 aa16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 HEXIM2Q96MH2 286 aaKnown RBP16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 RIPOR3Q96MK2 946 aa16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 NT5C1AQ9BXI3 368 aa16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 ZNF518BQ9C0D4 1074 aa16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 ABCB6Q9NP58 842 aa16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 SIX2Q9NPC8 291 aa16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 FAM49BQ9NUQ9 324 aa16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 HSFX1Q9UBD0 423 aa16.14■□□□□ 0.17
SMARCD1-211ENST00000551497 NOTCH4Q99466 2003 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 XYLBO75191 536 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 CALCAP01258 141 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 CCDC130P13994 396 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 PTPN2P17706 415 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 TBXAS1P24557 533 aaPredicted RBP16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 CACNA2D1P54289 1103 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 EPHB3P54753 998 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 CFAP221Q4G0U5 840 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 LRSAM1Q6UWE0 723 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 CYP26C1Q6V0L0 522 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 C4orf50Q6ZRC1 276 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 DNAJB7Q7Z6W7 309 aaPredicted RBP16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 SCN4BQ8IWT1 228 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 FUKQ8N0W3 1084 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 SLC4A11Q8NBS3 891 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 TMEM176AQ96HP8 235 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 ZNF512Q96ME7 567 aaPredicted RBP16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 NECAB3Q96P71 396 aaPredicted RBP16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 CORO1BQ9BR76 489 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 TSPY26PQ9H489 355 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 WDR6Q9NNW5 1121 aaKnown RBP16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 TMEM30AQ9NV96 361 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 AJAP1Q9UKB5 411 aaPredicted RBP16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 PCDHB4Q9Y5E5 795 aa16.13■□□□□ 0.17
SMARCD1-211ENST00000551497 NRG2O14511 850 aaPredicted RBP16.12■□□□□ 0.17
SMARCD1-211ENST00000551497 SP100P23497 879 aaPredicted RBP16.12■□□□□ 0.17
SMARCD1-211ENST00000551497 GRIK1P39086 918 aa16.12■□□□□ 0.17
SMARCD1-211ENST00000551497 KLK7P49862 253 aa16.12■□□□□ 0.17
SMARCD1-211ENST00000551497 GCNT1Q02742 428 aa16.12■□□□□ 0.17
SMARCD1-211ENST00000551497 ANKRD20A12PQ8NF67 263 aa16.12■□□□□ 0.17
SMARCD1-211ENST00000551497 FAM200AQ8TCP9 573 aa16.12■□□□□ 0.17
SMARCD1-211ENST00000551497 SLC2A14Q8TDB8 520 aa16.12■□□□□ 0.17
SMARCD1-211ENST00000551497 CYFIP2Q96F07 1278 aa16.12■□□□□ 0.17
SMARCD1-211ENST00000551497 FUBP3Q96I24 572 aaKnown RBP eCLIP16.12■□□□□ 0.17
SMARCD1-211ENST00000551497 NECTIN4Q96NY8 510 aa16.12■□□□□ 0.17
SMARCD1-211ENST00000551497 MED10Q9BTT4 135 aa16.12■□□□□ 0.17
SMARCD1-211ENST00000551497 FAM50BQ9Y247 325 aa16.12■□□□□ 0.17
SMARCD1-211ENST00000551497 CAVIN2O95810 425 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 TPM2P07951 284 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 RHOP08100 348 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 POU2F2P09086 479 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 ADORA2BP29275 332 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 MAGEA11P43364 429 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 RPL10AP62906 217 aaKnown RBP16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 PLD1Q13393 1074 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 MTMR3Q13615 1198 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 ARHGAP44Q17R89 818 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 TJAP1Q5JTD0 557 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 IQCEQ6IPM2 695 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 TMEM270Q6UE05 265 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 TTC39CQ8N584 583 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 ITFG1Q8TB96 612 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 RPGRIP1Q96KN7 1286 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 NAP1L5Q96NT1 182 aaPredicted RBP16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 KCNK16Q96T55 309 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 PHF7Q9BWX1 381 aaPredicted RBP16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 LSM14BQ9BX40 385 aaKnown RBP16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 LRRC3Q9BY71 257 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 ZNF334Q9HCZ1 680 aaPredicted RBP16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 APEX2Q9UBZ4 518 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 DNAJC12Q9UKB3 198 aa16.11■□□□□ 0.17
SMARCD1-211ENST00000551497 LGALS16A8MUM7 142 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 F8VP50 259 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 TEX33O43247 280 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 BEST1O76090 585 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 MYL4P12829 197 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 GJA1P17302 382 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 FSHRP23945 695 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 CCR2P41597 374 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 MFAP3P55082 362 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 ZNF445P59923 1031 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 YWHAEP62258 255 aaKnown RBP16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 UBXN1Q04323 297 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 PTPN21Q16825 1174 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms