RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SPC25Q9HBM1 224 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 ARHGEF4Q9NR80 690 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 PDGFCQ9NRA1 345 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 SLC9A2Q9UBY0 812 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 DDX20Q9UHI6 824 aaKnown RBP6.41□□□□□ -1.38
SCAF11-213ENST00000550629 FBXO2Q9UK22 296 aaPredicted RBP6.41□□□□□ -1.38
SCAF11-213ENST00000550629 PCDHA10Q9Y5I2 948 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 DDX49Q9Y6V7 483 aaKnown RBP6.41□□□□□ -1.38
SCAF11-213ENST00000550629 PMF1-BGLAPU3KQ54 211 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 MYH7BA7E2Y1 1941 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 IGKV6D-21A0A0A0MT36 114 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 DKC1O60832 514 aaKnown RBP eCLIP6.4□□□□□ -1.38
SCAF11-213ENST00000550629 CUTAO60888 179 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 CCNE2O96020 404 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 CCL5P13501 91 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 NCLP19338 710 aaKnown RBP6.4□□□□□ -1.38
SCAF11-213ENST00000550629 CST5P28325 142 aaPredicted RBP6.4□□□□□ -1.38
SCAF11-213ENST00000550629 CNGA1P29973 690 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 CCND3P30281 292 aaPredicted RBP6.4□□□□□ -1.38
SCAF11-213ENST00000550629 SLC6A11P48066 632 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 SLC26A2P50443 739 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 GJA9P57773 515 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 ACTR2P61160 394 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 CEBPZQ03701 1054 aaKnown RBP6.4□□□□□ -1.38
SCAF11-213ENST00000550629 LSAMPQ13449 338 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 IL17AQ16552 155 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 FSCN1Q16658 493 aaKnown RBP6.4□□□□□ -1.38
SCAF11-213ENST00000550629 HAUS3Q68CZ6 603 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 MIS18BP1Q6P0N0 1132 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 ABHD15Q6UXT9 468 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 MILR1Q7Z6M3 343 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 TLK2Q86UE8 772 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 SYT8Q8NBV8 401 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 ARRDC4Q8NCT1 418 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 ERMNQ8TAM6 284 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 SH3TC2Q8TF17 1288 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 SEPT1Q8WYJ6 367 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 ATP6V0A1Q93050 837 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 NOX5Q96PH1 765 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 GPR20Q99678 358 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 HSD17B14Q9BPX1 270 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 AARSD1Q9BTE6 412 aaKnown RBP6.4□□□□□ -1.38
SCAF11-213ENST00000550629 POLR3CQ9BUI4 534 aaPredicted RBP6.4□□□□□ -1.38
SCAF11-213ENST00000550629 FTOQ9C0B1 505 aaKnown RBP eCLIP6.4□□□□□ -1.38
SCAF11-213ENST00000550629 UNC45AQ9H3U1 944 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 LUC7LQ9NQ29 371 aaKnown RBP6.4□□□□□ -1.38
SCAF11-213ENST00000550629 XPNPEP3Q9NQH7 507 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 LRWD1Q9UFC0 647 aa6.4□□□□□ -1.38
SCAF11-213ENST00000550629 EMSYQ7Z589 1322 aa6.4□□□□□ -1.39
SCAF11-213ENST00000550629 SYNRGQ9UMZ2 1314 aa6.4□□□□□ -1.39
SCAF11-213ENST00000550629 KIAA1217Q5T5P2 1943 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 FAM237AA0A1B0GTK4 181 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.39□□□□□ -1.39
SCAF11-213ENST00000550629 VWA3AA6NCI4 1184 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 GOLGA6L22H0YM25 854 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 H7BY64 318 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 CTAGE5O15320 804 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 PRODHO43272 600 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 ADCY6O43306 1168 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 ZEB2O60315 1214 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 CABYRO75952 493 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 LYPLA2O95372 231 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 C8BP07358 591 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 GJB1P08034 283 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 SUPT20HL2P0C7V6 817 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 XRCC6P12956 609 aaKnown RBP eCLIP6.39□□□□□ -1.39
SCAF11-213ENST00000550629 CMA1P23946 247 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 RPA1P27694 616 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 UBA7P41226 1012 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 TECP42680 631 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 EPHA7Q15375 998 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 DGKDQ16760 1214 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 HSDL1Q3SXM5 330 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 FAM160B1Q5W0V3 765 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 KRT79Q5XKE5 535 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 ADALQ6DHV7 355 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 USP53Q70EK8 1073 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 PLPPR4Q7Z2D5 763 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 RNF180Q86T96 592 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 ADGRG2Q8IZP9 1017 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 PCSK9Q8NBP7 692 aaKnown RBP6.39□□□□□ -1.39
SCAF11-213ENST00000550629 OR6J1Q8NGC5 347 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 AFAP1L1Q8TED9 768 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 AFG1LQ8WV93 481 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 PYM1Q9BRP8 204 aaKnown RBP6.39□□□□□ -1.39
SCAF11-213ENST00000550629 SEZ6LQ9BYH1 1024 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 SMARCAD1Q9H4L7 1026 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 AZI2Q9H6S1 392 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 TUFT1Q9NNX1 390 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 CLDND1Q9NY35 253 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 ZNF215Q9UL58 517 aaPredicted RBP6.39□□□□□ -1.39
SCAF11-213ENST00000550629 OGDHLQ9ULD0 1010 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 PCDHA7Q9UN72 937 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 COA3Q9Y2R0 106 aaPredicted RBP6.39□□□□□ -1.39
SCAF11-213ENST00000550629 MSRB2Q9Y3D2 182 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 KDM3AQ9Y4C1 1321 aa6.39□□□□□ -1.39
SCAF11-213ENST00000550629 MYH15Q9Y2K3 1946 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 A0A1B0GTL3 188 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 GSTTP1A0A1W2PQM5 241 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 GOLGA6L4A6NEF3 574 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms