RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 TCP10LQ8TDR4 215 aa16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 OXNAD1Q96HP4 312 aaPredicted RBP16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 TBC1D10AQ9BXI6 508 aa16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 JMJD4Q9H9V9 463 aa16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 RAVER2Q9HCJ3 691 aaKnown RBP16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 KIF20BQ96Q89 1820 aa16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 WDR47O94967 919 aa16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 CYP11B1P15538 503 aa16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 C4orf22Q6V702 233 aa16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 NSUN6Q8TEA1 469 aaKnown RBP16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 ZNF75CPQ92670 426 aaPredicted RBP16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 SLC5A5Q92911 643 aa16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 ACSF2Q96CM8 615 aaPredicted RBP16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 C2orf40Q9H1Z8 148 aa16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 FAM205AQ6ZU69 1335 aa16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 AP3B1O00203 1094 aa16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 MLH1P40692 756 aa16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 CLEC10AQ8IUN9 316 aa16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 PAIP1Q9H074 479 aaKnown RBP16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 COG4Q9H9E3 785 aa16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 GIMAP4Q9NUV9 329 aa16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 CIITAP33076 1130 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 MMADHCQ9H3L0 296 aaPredicted RBP16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 ZNF302Q9NR11 478 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 SHOX2O60902 331 aaPredicted RBP16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 DGAT1O75907 488 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 SOX11P35716 441 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 TBL3Q12788 808 aaKnown RBP16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 TERB1Q8NA31 727 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 SLC20A1Q8WUM9 679 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 IL1RL2Q9HB29 575 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 C3orf70A6NLC5 250 aaPredicted RBP16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 NFIBO00712 420 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 NTSR2O95665 410 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 RARAP10276 462 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 GPSM2P81274 684 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 NME3Q13232 169 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 AUHQ13825 339 aaKnown RBP16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 COBLL1Q53SF7 1204 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 RNF43Q68DV7 783 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 GPAT2Q6NUI2 795 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 LRRC4BQ9NT99 713 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 SIK3Q9Y2K2 1263 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 TRPC5OSA6NMA1 111 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 SHBGP04278 402 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 PSMA4P25789 261 aaKnown RBP16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 EXD1Q8NHP7 514 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 MAGEC3Q8TD91 643 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 FRMD8P1Q9BZ68 369 aaPredicted RBP16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 SCN3BQ9NY72 215 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 DCDC2Q9UHG0 476 aa16.43■□□□□ 0.22
RBFOX1-212ENST00000550418 DDX3XO00571 662 aaKnown RBP eCLIP16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 ENTPD5O75356 428 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 PYGMP11217 842 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 VCAM1P19320 739 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 RRM1P23921 792 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 HMOX2P30519 316 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 SGSM1Q2NKQ1 1148 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 TFDP3Q5H9I0 405 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 ZBTB49Q6ZSB9 765 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 C16orf86Q6ZW13 317 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 DEFB132Q7Z7B7 95 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 PTPRN2Q92932 1015 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 RUSC1Q9BVN2 902 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 ARMCX1Q9P291 453 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 PNMA3Q9UL41 463 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 STARD13Q9Y3M8 1113 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 ZNF839A8K0R7 811 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 HUS1O60921 280 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 GRK2P25098 689 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 STXBP2Q15833 593 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 KBTBD12Q3ZCT8 623 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 C2CD6Q53TS8 623 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 FAXCQ5TGI0 409 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 KRT35Q92764 455 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 IFT43Q96FT9 208 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 KIAA1683Q9H0B3 1180 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 BRD8Q9H0E9 1235 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 TOPORSQ9NS56 1045 aaPredicted RBP16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 CCDC78A2IDD5 438 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 MED24O75448 989 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 USP1O94782 785 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 PROSCO94903 275 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 PHKA2P46019 1235 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 MCL1Q07820 350 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 DMC1Q14565 340 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 PKN2Q16513 984 aaKnown RBP16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 PARD3BQ8TEW8 1205 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 SNX19Q92543 992 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 ZNF669Q96BR6 464 aaPredicted RBP16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 SHOC2Q9UQ13 582 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 MROH7Q68CQ1 1323 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 SIGLEC1Q9BZZ2 1709 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 GTF2H1P32780 548 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 MRPL28Q13084 256 aaKnown RBP16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 GIT2Q14161 759 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 RC3H1Q5TC82 1133 aaKnown RBP16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 TRAF7Q6Q0C0 670 aa16.42■□□□□ 0.22
RBFOX1-212ENST00000550418 CATSPER4Q7RTX7 472 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms