RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 ZNF484Q5JVG2 852 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 KDM7AQ6ZMT4 941 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 L3MBTL3Q96JM7 780 aaPredicted RBP15.69■□□□□ 0.1
CUX1-214ENST00000550008 PLEKHA5Q9HAU0 1116 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 GBA2Q9HCG7 927 aaPredicted RBP15.69■□□□□ 0.1
CUX1-214ENST00000550008 TSPAN16Q9UKR8 245 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 PCDHA3Q9Y5H8 950 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 ABCC6O95255 1503 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 PMLP29590 882 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 TSTA3Q13630 321 aaPredicted RBP15.69■□□□□ 0.1
CUX1-214ENST00000550008 ATG16L1Q676U5 607 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 USP18Q9UMW8 372 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 PLIN4Q96Q06 1357 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 PHLPP1O60346 1717 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 M0QYT0 321 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 SYF2O95926 243 aaKnown RBP15.68■□□□□ 0.1
CUX1-214ENST00000550008 ETS1P14921 441 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 KRT4P19013 534 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 GRIK4Q16099 956 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 FAM117BQ6P1L5 589 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 SLC9A9Q8IVB4 645 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 WDR75Q8IWA0 830 aaKnown RBP15.68■□□□□ 0.1
CUX1-214ENST00000550008 NCAPGQ9BPX3 1015 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 DUOX1Q9NRD9 1551 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 UPP2O95045 317 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 TAF6P49848 677 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 EPHB1P54762 984 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 KYAT1Q16773 422 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 LVRNQ6Q4G3 990 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 PRELID2Q8N945 189 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 APOL2Q9BQE5 337 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 GDF3Q9NR23 364 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 CPSF2Q9P2I0 782 aaKnown RBP15.68■□□□□ 0.1
CUX1-214ENST00000550008 PSMC3IPQ9P2W1 217 aaPredicted RBP15.68■□□□□ 0.1
CUX1-214ENST00000550008 CXCL11O14625 94 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 NFICP08651 508 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 ZNF200P98182 395 aaPredicted RBP15.68■□□□□ 0.1
CUX1-214ENST00000550008 BEX3Q00994 111 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 TTMPQ5BVD1 217 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 ERP27Q96DN0 273 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 CYP4F11Q9HBI6 524 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 DDIT4Q9NX09 232 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 ATP8B3O60423 1300 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 HAUS5O94927 633 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 CD4P01730 458 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 VDRP11473 427 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 TPD52P55327 224 aaPredicted RBP15.68■□□□□ 0.1
CUX1-214ENST00000550008 BBS5Q8N3I7 341 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 LCMT1Q9UIC8 334 aa15.68■□□□□ 0.1
CUX1-214ENST00000550008 USP15Q9Y4E8 981 aaPredicted RBP15.68■□□□□ 0.1
CUX1-214ENST00000550008 DCTN3O75935 186 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 SHBGP04278 402 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 THPOP40225 353 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 GTF2A2P52657 109 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 SPIRE1Q08AE8 756 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 STILQ15468 1287 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 ZPBP2Q6X784 338 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 FBXO36Q8NEA4 188 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 EXD1Q8NHP7 514 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 DCLK3Q9C098 648 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 UBQLN1Q9UMX0 589 aaKnown RBP15.67■□□□□ 0.1
CUX1-214ENST00000550008 SPATA31C2B4DYI2 1134 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 LGALS2P05162 132 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 FLT3P36888 993 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 MARSP56192 900 aaKnown RBP15.67■□□□□ 0.1
CUX1-214ENST00000550008 ZACNQ401N2 412 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 DENND1BQ6P3S1 775 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 DAW1Q8N136 415 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 GBP7Q8N8V2 638 aaPredicted RBP15.67■□□□□ 0.1
CUX1-214ENST00000550008 CTNNAL1Q9UBT7 734 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 PHRF1Q9P1Y6 1649 aaKnown RBP15.67■□□□□ 0.1
CUX1-214ENST00000550008 GOLGA8CPA6NN73 597 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 GMNNO75496 209 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 C1QBPQ07021 282 aaKnown RBP15.67■□□□□ 0.1
CUX1-214ENST00000550008 EP400NLQ6ZTU2 488 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 RIOX2Q8IUF8 465 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 GSDMBQ8TAX9 411 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 ADAM32Q8TC27 787 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 VPS33BQ9H267 617 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 ERVK-5Q9HDB9 667 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 UBN1Q9NPG3 1134 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 IPO11Q9UI26 975 aaKnown RBP15.67■□□□□ 0.1
CUX1-214ENST00000550008 SPEF2Q9C093 1822 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 LRP6O75581 1613 aa15.67■□□□□ 0.1
CUX1-214ENST00000550008 RRN3P2A6NIE6 340 aa15.66■□□□□ 0.1
CUX1-214ENST00000550008 EEF2KO00418 725 aaKnown RBP15.66■□□□□ 0.1
CUX1-214ENST00000550008 EPHB2P29323 1055 aa15.66■□□□□ 0.1
CUX1-214ENST00000550008 RFC1P35251 1148 aaPredicted RBP15.66■□□□□ 0.1
CUX1-214ENST00000550008 CASP2P42575 452 aa15.66■□□□□ 0.1
CUX1-214ENST00000550008 DRP2Q13474 957 aa15.66■□□□□ 0.1
CUX1-214ENST00000550008 RASSF3Q86WH2 238 aa15.66■□□□□ 0.1
CUX1-214ENST00000550008 PPIL6Q8IXY8 311 aa15.66■□□□□ 0.1
CUX1-214ENST00000550008 CCDC124Q96CT7 223 aaKnown RBP15.66■□□□□ 0.1
CUX1-214ENST00000550008 PABPC5Q96DU9 382 aaKnown RBP15.66■□□□□ 0.1
CUX1-214ENST00000550008 NR2E1Q9Y466 385 aa15.66■□□□□ 0.1
CUX1-214ENST00000550008 UMODL1Q5DID0 1318 aa15.66■□□□□ 0.1
CUX1-214ENST00000550008 CASTOR2A6NHX0 329 aa15.66■□□□□ 0.1
CUX1-214ENST00000550008 SSTR1P30872 391 aa15.66■□□□□ 0.1
CUX1-214ENST00000550008 PCSK7Q16549 785 aa15.66■□□□□ 0.1
CUX1-214ENST00000550008 NFIL3Q16649 462 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms