RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 HIF1AQ16665 826 aa13.41□□□□□ -0.26
CALCOCO1-217ENST00000549935 LMBRD2Q68DH5 695 aaPredicted RBP13.41□□□□□ -0.26
CALCOCO1-217ENST00000549935 CCDC62Q6P9F0 684 aa13.41□□□□□ -0.26
CALCOCO1-217ENST00000549935 RINLQ6ZS11 566 aa13.41□□□□□ -0.26
CALCOCO1-217ENST00000549935 ZC3H18Q86VM9 953 aaKnown RBP13.41□□□□□ -0.26
CALCOCO1-217ENST00000549935 CEP170P1Q96L14 293 aa13.41□□□□□ -0.26
CALCOCO1-217ENST00000549935 GMLQ99445 158 aa13.41□□□□□ -0.26
CALCOCO1-217ENST00000549935 FAM213AQ9BRX8 229 aa13.41□□□□□ -0.26
CALCOCO1-217ENST00000549935 ANKEF1Q9NU02 776 aa13.41□□□□□ -0.26
CALCOCO1-217ENST00000549935 IP6K2Q9UHH9 426 aa13.41□□□□□ -0.26
CALCOCO1-217ENST00000549935 SNCAIPQ9Y6H5 919 aa13.41□□□□□ -0.26
CALCOCO1-217ENST00000549935 SLC4A7Q9Y6M7 1214 aa13.41□□□□□ -0.26
CALCOCO1-217ENST00000549935 A0A0G2JND7 137 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 SMAPO00193 183 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 FAM155BO75949 473 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 ZSCAN5DPP0CG00 497 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 ESRRAP11474 423 aaPredicted RBP13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 CD58P19256 250 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 SERPINB3P29508 390 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 SFNP31947 248 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 HSPA1LP34931 641 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 ETV4P43268 484 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 NOMO3P69849 1222 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 CLDN10P78369 228 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 KRT76Q01546 638 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 CUL3Q13618 768 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 WDR72Q3MJ13 1102 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 CIAPIN1Q6FI81 312 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 NLRX1Q86UT6 975 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 PDCD2LQ9BRP1 358 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 TMEM120AQ9BXJ8 343 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 SLC38A10Q9HBR0 1119 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 C1orf112Q9NSG2 853 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 WDR46O15213 610 aaKnown RBP13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 GLRA2P23416 452 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 DSG3P32926 999 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 PIK3CAP42336 1068 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 PSMC4P43686 418 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 NEK3P51956 506 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 GHRHRQ02643 423 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 CDK18Q07002 472 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 ARHGEF16Q5VV41 709 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 NET1Q7Z628 596 aaPredicted RBP13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 TMPRSS6Q8IU80 811 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 SCYL3Q8IZE3 742 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 ABRAQ8N0Z2 381 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 GPD1LQ8N335 351 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 FEZF2Q8TBJ5 459 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 DCAKDQ8WVC6 231 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 PAFAH2Q99487 392 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 SENP7Q9BQF6 1050 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 NTPCRQ9BSD7 190 aaKnown RBP13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 FRMD8P1Q9BZ68 369 aaPredicted RBP13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 PXMP2Q9NR77 195 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 ZNF277Q9NRM2 450 aaPredicted RBP13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 PARVAQ9NVD7 372 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 IL1RAPL1Q9NZN1 696 aa13.4□□□□□ -0.26
CALCOCO1-217ENST00000549935 TLR3O15455 904 aaKnown RBP13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 ATP5BP06576 529 aaKnown RBP13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 ARL4CP56559 192 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 SP4Q02446 784 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 SLC18A2Q05940 514 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 OVGP1Q12889 678 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 TRMT5Q32P41 509 aaKnown RBP13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 PPIL6Q8IXY8 311 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 KBTBD2Q8IY47 623 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 SLC35B2Q8TB61 432 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 PYROXD1Q8WU10 500 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 GBP5Q96PP8 586 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 ASCC2Q9H1I8 757 aaPredicted RBP13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 ARHGEF4Q9NR80 690 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 CNTN3Q9P232 1028 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 GABBR1Q9UBS5 961 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 EFR3BQ9Y2G0 817 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 TBC1D30Q9Y2I9 924 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 PSME4Q14997 1843 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 CAPN14A8MX76 684 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 ZNF862O60290 1169 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 LYNP07948 512 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 ETS1P14921 441 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 BRD2P25440 801 aaKnown RBP13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 CRABP2P29373 138 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 SSTR3P32745 418 aaPredicted RBP13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 GJC1P36383 396 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 PGM1P36871 562 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 POLE2P56282 527 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 NOP14P78316 857 aaKnown RBP13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 ZBTB16Q05516 673 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 CBLBQ13191 982 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 TFDP1Q14186 410 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 MFSD7Q6UXD7 560 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 SPOCD1Q6ZMY3 1216 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 SH2D5Q6ZV89 423 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 ADGRG6Q86SQ4 1221 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 SDCCAG8Q86SQ7 713 aaPredicted RBP13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 LRRC6Q86X45 466 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 PDCD7Q8N8D1 485 aaKnown RBP13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 CCDC110Q8TBZ0 833 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 SPIRE2Q8WWL2 714 aa13.39□□□□□ -0.27
CALCOCO1-217ENST00000549935 ZNF516Q92618 1163 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms