RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 ZBTB46Q86UZ6 589 aa5.36□□□□□ -1.55
CCDC38-208ENST00000549876 ZCRB1Q8TBF4 217 aaKnown RBP5.36□□□□□ -1.55
CCDC38-208ENST00000549876 ATRIPQ8WXE1 791 aa5.36□□□□□ -1.55
CCDC38-208ENST00000549876 FAM167AQ96KS9 214 aa5.36□□□□□ -1.55
CCDC38-208ENST00000549876 BRINP2Q9C0B6 783 aa5.36□□□□□ -1.55
CCDC38-208ENST00000549876 PRSS22Q9GZN4 317 aa5.36□□□□□ -1.55
CCDC38-208ENST00000549876 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.35□□□□□ -1.55
CCDC38-208ENST00000549876 DCLK1O15075 740 aa5.35□□□□□ -1.55
CCDC38-208ENST00000549876 PDHA1P08559 390 aa5.35□□□□□ -1.55
CCDC38-208ENST00000549876 CCKBRP32239 447 aa5.35□□□□□ -1.55
CCDC38-208ENST00000549876 EXOSC9Q06265 439 aaKnown RBP5.35□□□□□ -1.55
CCDC38-208ENST00000549876 LAMB3Q13751 1172 aa5.35□□□□□ -1.55
CCDC38-208ENST00000549876 ZNF618Q5T7W0 954 aa5.35□□□□□ -1.55
CCDC38-208ENST00000549876 FANCBQ8NB91 859 aa5.35□□□□□ -1.55
CCDC38-208ENST00000549876 FAM46DQ8NEK8 389 aa5.35□□□□□ -1.55
CCDC38-208ENST00000549876 DDX17Q92841 729 aaKnown RBP5.35□□□□□ -1.55
CCDC38-208ENST00000549876 MVB12AQ96EY5 273 aa5.35□□□□□ -1.55
CCDC38-208ENST00000549876 ADGRE3Q9BY15 652 aa5.35□□□□□ -1.55
CCDC38-208ENST00000549876 SMIM22K7EJ46 135 aa5.34□□□□□ -1.55
CCDC38-208ENST00000549876 PPM1DO15297 605 aa5.34□□□□□ -1.55
CCDC38-208ENST00000549876 DNAJB5O75953 348 aa5.34□□□□□ -1.55
CCDC38-208ENST00000549876 GNAI2P04899 355 aa5.34□□□□□ -1.55
CCDC38-208ENST00000549876 PIM1P11309 404 aaPredicted RBP5.34□□□□□ -1.55
CCDC38-208ENST00000549876 CD6P30203 668 aa5.34□□□□□ -1.55
CCDC38-208ENST00000549876 NEK2P51955 445 aa5.34□□□□□ -1.55
CCDC38-208ENST00000549876 ZNF134P52741 427 aa5.34□□□□□ -1.55
CCDC38-208ENST00000549876 TEDDM1Q5T9Z0 273 aa5.34□□□□□ -1.55
CCDC38-208ENST00000549876 EMC10Q5UCC4 262 aa5.34□□□□□ -1.55
CCDC38-208ENST00000549876 FAM160B1Q5W0V3 765 aa5.34□□□□□ -1.55
CCDC38-208ENST00000549876 TMEM108Q6UXF1 575 aa5.34□□□□□ -1.55
CCDC38-208ENST00000549876 CATSPERGQ6ZRH7 1159 aa5.34□□□□□ -1.55
CCDC38-208ENST00000549876 KRT73Q86Y46 540 aa5.34□□□□□ -1.55
CCDC38-208ENST00000549876 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.34□□□□□ -1.55
CCDC38-208ENST00000549876 HPS3Q969F9 1004 aa5.34□□□□□ -1.55
CCDC38-208ENST00000549876 TMEM79Q9BSE2 394 aa5.34□□□□□ -1.55
CCDC38-208ENST00000549876 TUBA8Q9NY65 449 aaPredicted RBP5.34□□□□□ -1.55
CCDC38-208ENST00000549876 DLL3Q9NYJ7 618 aa5.34□□□□□ -1.55
CCDC38-208ENST00000549876 HESX1Q9UBX0 185 aa5.34□□□□□ -1.55
CCDC38-208ENST00000549876 CYP2D7A0A087X1C5 515 aa5.33□□□□□ -1.56
CCDC38-208ENST00000549876 SMIM35A0A1B0GVV1 85 aa5.33□□□□□ -1.56
CCDC38-208ENST00000549876 H3BUI4 141 aa5.33□□□□□ -1.56
CCDC38-208ENST00000549876 ALDH2P05091 517 aa5.33□□□□□ -1.56
CCDC38-208ENST00000549876 ALDH9A1P49189 494 aa5.33□□□□□ -1.56
CCDC38-208ENST00000549876 SP2Q02086 613 aa5.33□□□□□ -1.56
CCDC38-208ENST00000549876 ATAT1Q5SQI0 421 aa5.33□□□□□ -1.56
CCDC38-208ENST00000549876 ZNF804AQ7Z570 1209 aa5.33□□□□□ -1.56
CCDC38-208ENST00000549876 WDR53Q7Z5U6 358 aaPredicted RBP5.33□□□□□ -1.56
CCDC38-208ENST00000549876 DTX2Q86UW9 622 aa5.33□□□□□ -1.56
CCDC38-208ENST00000549876 HOOK2Q96ED9 719 aa5.33□□□□□ -1.56
CCDC38-208ENST00000549876 SLC35A4Q96G79 324 aa5.33□□□□□ -1.56
CCDC38-208ENST00000549876 SLC46A1Q96NT5 459 aa5.33□□□□□ -1.56
CCDC38-208ENST00000549876 NELL2Q99435 816 aa5.33□□□□□ -1.56
CCDC38-208ENST00000549876 NUP88Q99567 741 aaPredicted RBP5.33□□□□□ -1.56
CCDC38-208ENST00000549876 VPS16Q9H269 839 aa5.33□□□□□ -1.56
CCDC38-208ENST00000549876 IP6K2Q9UHH9 426 aa5.33□□□□□ -1.56
CCDC38-208ENST00000549876 ZNF580Q9UK33 172 aa5.33□□□□□ -1.56
CCDC38-208ENST00000549876 FNDC1Q4ZHG4 1894 aaPredicted RBP5.32□□□□□ -1.56
CCDC38-208ENST00000549876 ABLIM3O94929 683 aa5.32□□□□□ -1.56
CCDC38-208ENST00000549876 MMP13P45452 471 aa5.32□□□□□ -1.56
CCDC38-208ENST00000549876 SOX8P57073 446 aa5.32□□□□□ -1.56
CCDC38-208ENST00000549876 EEFSECP57772 596 aaKnown RBP5.32□□□□□ -1.56
CCDC38-208ENST00000549876 DAZAP2Q15038 168 aaPredicted RBP5.32□□□□□ -1.56
CCDC38-208ENST00000549876 MAVSQ7Z434 540 aa5.32□□□□□ -1.56
CCDC38-208ENST00000549876 GALNT16Q8N428 558 aa5.32□□□□□ -1.56
CCDC38-208ENST00000549876 CELF5Q8N6W0 485 aaKnown RBP5.32□□□□□ -1.56
CCDC38-208ENST00000549876 C8orf58Q8NAV2 365 aa5.32□□□□□ -1.56
CCDC38-208ENST00000549876 PLBD2Q8NHP8 589 aa5.32□□□□□ -1.56
CCDC38-208ENST00000549876 BRIX1Q8TDN6 353 aaKnown RBP5.32□□□□□ -1.56
CCDC38-208ENST00000549876 HMCESQ96FZ2 354 aa5.32□□□□□ -1.56
CCDC38-208ENST00000549876 TTYH3Q9C0H2 523 aa5.32□□□□□ -1.56
CCDC38-208ENST00000549876 SLC12A5Q9H2X9 1139 aa5.32□□□□□ -1.56
CCDC38-208ENST00000549876 PCDHA6Q9UN73 950 aa5.32□□□□□ -1.56
CCDC38-208ENST00000549876 ANKRD6Q9Y2G4 727 aa5.32□□□□□ -1.56
CCDC38-208ENST00000549876 NOP58Q9Y2X3 529 aaKnown RBP5.32□□□□□ -1.56
CCDC38-208ENST00000549876 KCNU1A8MYU2 1149 aa5.31□□□□□ -1.56
CCDC38-208ENST00000549876 INSIG1O15503 277 aa5.31□□□□□ -1.56
CCDC38-208ENST00000549876 CBSLP0DN79 551 aa5.31□□□□□ -1.56
CCDC38-208ENST00000549876 PF4V1P10720 104 aa5.31□□□□□ -1.56
CCDC38-208ENST00000549876 VCAM1P19320 739 aa5.31□□□□□ -1.56
CCDC38-208ENST00000549876 CBSP35520 551 aa5.31□□□□□ -1.56
CCDC38-208ENST00000549876 LIPAP38571 399 aa5.31□□□□□ -1.56
CCDC38-208ENST00000549876 RAPGEF1Q13905 1077 aa5.31□□□□□ -1.56
CCDC38-208ENST00000549876 ZNF260Q3ZCT1 412 aa5.31□□□□□ -1.56
CCDC38-208ENST00000549876 LONRF3Q496Y0 759 aa5.31□□□□□ -1.56
CCDC38-208ENST00000549876 RUSC1-AS1Q66K80 236 aa5.31□□□□□ -1.56
CCDC38-208ENST00000549876 SFRP4Q6FHJ7 346 aaPredicted RBP5.31□□□□□ -1.56
CCDC38-208ENST00000549876 CHSY1Q86X52 802 aa5.31□□□□□ -1.56
CCDC38-208ENST00000549876 SAMD14Q8IZD0 417 aaPredicted RBP5.31□□□□□ -1.56
CCDC38-208ENST00000549876 CDK5RAP3Q96JB5 506 aa5.31□□□□□ -1.56
CCDC38-208ENST00000549876 CAMKK2Q96RR4 588 aa5.31□□□□□ -1.56
CCDC38-208ENST00000549876 CGRRF1Q99675 332 aa5.31□□□□□ -1.56
CCDC38-208ENST00000549876 AASDHPPTQ9NRN7 309 aa5.31□□□□□ -1.56
CCDC38-208ENST00000549876 SSX2IPQ9Y2D8 614 aa5.31□□□□□ -1.56
CCDC38-208ENST00000549876 QSOX1O00391 747 aa5.3□□□□□ -1.56
CCDC38-208ENST00000549876 UNC5CO95185 931 aa5.3□□□□□ -1.56
CCDC38-208ENST00000549876 CYP2C18P33260 490 aa5.3□□□□□ -1.56
CCDC38-208ENST00000549876 POLGP54098 1239 aaPredicted RBP5.3□□□□□ -1.56
CCDC38-208ENST00000549876 CYP4F2P78329 520 aa5.3□□□□□ -1.56
CCDC38-208ENST00000549876 CCDC157Q569K6 752 aa5.3□□□□□ -1.56
CCDC38-208ENST00000549876 KHDC1LQ5JSQ8 128 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms