RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 CYP11B1P15538 503 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 POU3F3P20264 500 aaPredicted RBP10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 OR1D2P34982 312 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 CYLC1P35663 651 aaPredicted RBP10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 ACADSBP45954 432 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 FXR1P51114 621 aaKnown RBP eCLIP10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 ROR1Q01973 937 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 BST2Q10589 180 aaKnown RBP10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 VEPH1Q14D04 833 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 ZNF394Q53GI3 561 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 MDH1BQ5I0G3 518 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 LIN9Q5TKA1 542 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 LCLAT1Q6UWP7 414 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 CYP26C1Q6V0L0 522 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 ACOT1Q86TX2 421 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 OSTM1Q86WC4 334 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 CCDC170Q8IYT3 715 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 ELMOD1Q8N336 334 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 ANKRD52Q8NB46 1076 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 EPS8L1Q8TE68 723 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 CPLX3Q8WVH0 158 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 KAT5Q92993 513 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 VN1R3Q9BXE9 311 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 UBXN6Q9BZV1 441 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 GPR88Q9GZN0 384 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 LHX5Q9H2C1 402 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 DMAP1Q9NPF5 467 aaPredicted RBP10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 DZANK1Q9NVP4 752 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 COMMD8Q9NX08 183 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 PRRG1O14668 218 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 TEX28O15482 410 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 SART1O43290 800 aaKnown RBP10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 ABLIM3O94929 683 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 ARHGEF15O94989 841 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 CNPP09543 421 aaKnown RBP10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 NPR3P17342 541 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 TNFAIP3P21580 790 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 LMO2P25791 158 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 HOXA9P31269 272 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 CLCN1P35523 988 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 ALDH1A3P47895 512 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 CDR2Q01850 454 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 CYP27A1Q02318 531 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 SLC39A12Q504Y0 691 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 C10orf76Q5T2E6 689 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 PRSS55Q6UWB4 352 aaPredicted RBP10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 TAS1R1Q7RTX1 841 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 ITIH5Q86UX2 942 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 FAM35AQ86V20 835 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 TMTC1Q8IUR5 882 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 SPC24Q8NBT2 197 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 TMEM35BQ8NCS4 154 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 OR10T2Q8NGX3 314 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 WHAMMQ8TF30 809 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 GDPD5Q8WTR4 605 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 STK32AQ8WU08 396 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 ZNF606Q8WXB4 792 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 CASP10Q92851 521 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 MYLPFQ96A32 169 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 TRIM11Q96F44 468 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 PDLIM2Q96JY6 352 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 CCDC42Q96M95 316 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 KLHL5Q96PQ7 755 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 PKMYT1Q99640 499 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 RTP3Q9BQQ7 232 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 CLSTN3Q9BQT9 956 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 TRIM62Q9BVG3 475 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 TLE6Q9H808 572 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 GTF3C4Q9UKN8 822 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 ASB3Q9Y575 518 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 LAMA3Q16787 3333 aa10.35□□□□□ -0.75
SMARCD1-206ENST00000549274 TRANK1O15050 2925 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 CHD7Q9P2D1 2997 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 MTMR11A4FU01 709 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 M0QYV0 167 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 O00370 1275 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 XPO1O14980 1071 aaKnown RBP10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 RTN3O95197 1032 aaPredicted RBP10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 FGF19O95750 216 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 POU2F2P09086 479 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 HNRNPA1P09651 372 aaKnown RBP eCLIP10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 ACAT1P24752 427 aaKnown RBP10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 EPHB3P54753 998 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 ARPP19P56211 112 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 ERVFC1P60507 584 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 PSMC1P62191 440 aaKnown RBP10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 APBA1Q02410 837 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 ARID5AQ03989 594 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 DUSP6Q16828 381 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 SCARA3Q6AZY7 606 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 IRF2BP2Q7Z5L9 587 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 SLC47A2Q86VL8 602 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 ZDHHC17Q8IUH5 632 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 TCEAL8Q8IYN2 117 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 TMEM130Q8N3G9 435 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 TC2NQ8N9U0 490 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 SLC2A14Q8TDB8 520 aa10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 IPO4Q8TEX9 1081 aaKnown RBP10.34□□□□□ -0.75
SMARCD1-206ENST00000549274 PCED1BQ96HM7 432 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms